iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121295

Ensembl Protein ID

EOY08489

UniProt Accession

A0A061F1U4; A0A061F1U4_THECC

Genbank Protein ID

EOY08489.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001883

Gene Name

TCM_022960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_022960	EOY08489	EOY08489

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.70e-34	117.2	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl.teedlvPnltlrrliqawceens 73
           evp++f+CpIsl++M+dPv++ +Gitydr+sIe+wl +g++ +cPvt+qpl +++dl+Pn+tlrrliqawc en+
   Q: 5    EVPKYFVCPISLQIMKDPVTAITGITYDRESIEQWLLKGKNtSCPVTQQPLpRDSDLTPNHTLRRLIQAWCTENA 79
           69**********************************8888779********9999*****************997 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDDIEVPKYF VCPISLQIMK DPVTAITGIT YDRESIEQWL LKGKNTSCPV TQQPLPRDSD 60
LTPNHTLRRL IQAWCTENAS LGVDRIPTPK PSVDKFHFRK LIKELDKHPD SKMEALRELD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGGAGACT TGGCATTTAT GAAAATAGTA ATATATCATC CACACAGGAC AATTACTTGT 60
TTTTATGAAA ATTGTAATAT ATTAGATTAA ACGGTATCAG GCGAGGCGTT ACGTGTTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006382	Arabidopsis lyrata	47.14	5.00e-100	357.00
IUUC-Ath-007017	Arabidopsis thaliana	46.88	2.00e-103	368.00
IUUC-Bol-016395	Brassica oleracea	46.22	1.00e-99	355.00
IUUC-Bra-017865	Brassica rapa	46.64	9.00e-104	369.00
IUUC-Mtr-057873	Medicago truncatula	61.00	1.00e-143	502.00
IUUC-Pop-099498	Populus trichocarpa	65.92	1.00e-155	541.00
IUUC-Ppe-101540	Prunus persica	65.27	5.00e-160	556.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence