iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098958

Ensembl Protein ID

POPTR_0016s07660.1

UniProt Accession

B9IIS0; B9IIS0_POPTR

Genbank Protein ID

EEF04575.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_576561; POPTR_0016s07660g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s07660	POPTR_0016s07660.1	POPTR_0016s07660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-18	65.7	165	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H  +v+++++    ++++s s+Dg+++v+Dlr+
   Q: 165  HDKEVNDISWgwF-NIFASVSGDGSVRVCDLRK 196
           8899******542.7***************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESSSQKGPV ICTYVAQWPI YSLAWSARRD KKTRLAIGSF LEDYSNKVEI VQFNSDTSDF 60
TTDSRLIFDH PYSPTNLMFF PSEDVANPDI IITSGDYMRI WQIYDDRIEL KSLLNGNKCS 120

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Nucleotide Sequence
(Fasta)

GAGACATACG ACCGGAGGGC ATTCTTATGT GCACCTGTCA ATAATCGATC AAAGCAACCA 60
TGGAAAGCTC TTCACAGAAA GGACCAGTCA TCTGCACTTA CGTAGCTCAA TGGCCTATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0016s07660g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence