iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099649

Ensembl Protein ID

POPTR_0017s04650.1

UniProt Accession

B9HGQ7; B9HGQ7_POPTR

Genbank Protein ID

EEE90860.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_832186; POPTR_0007s01180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s04650	POPTR_0017s04650.1	POPTR_0017s04650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-26	92.4	107	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ v++l   +d  +lvs++ D+t+++W++
   Q: 107  GHQGAVRGLTAsTDgSTLVSCGTDCTVRLWNV 138
           8*******987877899**************7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKVKVISRST DEFTRERSQD LQRVFHNFDP NLRTQEKAVE YQRALNAAKL DKIFARPFIG 60
AMDGHIDAVS CMAKNPNYLK GIFSGSMDGD IRLWDIANRR TVCQFPGHQG AVRGLTASTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAGGGTTT CTCTCTCTCT AACAACCCAG CTGAACCAGA CATCTCTCCA TCTCTTCCAT 60
TAATACTTGA ACTGTAAAAT TGAAACCCTA ATTCACTATG AAAGTGAAAG TAATTTCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pop:POPTR_0007s01180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	46.78	7.00e-127	446.00
IUUC-Atr-002799	Amborella trichopoda	76.77	0.00e+00	752.00
IUUC-Apl-003675	Anas platyrhynchos	47.12	3.00e-122	431.00
IUUC-Aca-004792	Anolis carolinensis	47.57	2.00e-132	465.00
IUUC-Aly-005998	Arabidopsis lyrata	82.52	0.00e+00	804.00
IUUC-Ath-007526	Arabidopsis thaliana	82.30	0.00e+00	798.00
IUUC-Ago-007774	Ashbya gossypii	44.92	7.00e-120	423.00
IUUC-Acl-008024	Aspergillus clavatus	44.67	2.00e-109	388.00
IUUC-Afu-008930	Aspergillus fumigatus	42.22	9.00e-104	370.00
IUUC-Ani-009370	Aspergillus nidulans	43.05	1.00e-106	379.00
IUUC-Ang-009827	Aspergillus niger	44.85	7.00e-107	380.00
IUUC-Aor-010060	Aspergillus oryzae	43.51	2.00e-101	362.00
IUUC-Ate-010434	Aspergillus terreus	47.28	7.00e-96	343.00
IUUC-Ame-011967	Astyanax mexicanus	46.14	9.00e-121	426.00
IUUC-Bgr-011989	Blumeria graminis	43.81	1.00e-105	375.00
IUUC-Bta-013291	Bos taurus	35.82	1.00e-78	286.00
IUUC-Bci-013868	Botrytis cinerea	42.20	3.00e-104	371.00
IUUC-Bdi-014343	Brachypodium distachyon	76.55	0.00e+00	730.00
IUUC-Bol-015740	Brassica oleracea	80.53	0.00e+00	744.00
IUUC-Bra-016689	Brassica rapa	80.53	0.00e+00	741.00
IUUC-Cel-018536	Caenorhabditis elegans	38.35	5.00e-93	334.00
IUUC-Cja-018779	Callithrix jacchus	47.23	2.00e-130	458.00
IUUC-Cfa-020105	Canis familiaris	47.67	7.00e-132	463.00
IUUC-Cpo-021538	Cavia porcellus	47.01	1.00e-126	445.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	66.26	1.00e-64	237.00
IUUC-Csa-023492	Chlorocebus sabaeus	47.45	1.00e-130	459.00
IUUC-Cho-024497	Choloepus hoffmanni	42.28	3.00e-75	275.00
IUUC-Cin-025524	Ciona intestinalis	50.11	3.00e-136	477.00
IUUC-Csv-026197	Ciona savignyi	49.44	2.00e-133	468.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	42.14	1.00e-96	346.00
IUUC-Cne-026840	Cryptococcus neoformans	33.00	8.00e-68	252.00
IUUC-Cme-027111	Cyanidioschyzon merolae	34.42	3.00e-72	265.00
IUUC-Dre-027471	Danio rerio	48.28	4.00e-127	447.00
IUUC-Dno-029790	Dasypus novemcinctus	46.93	8.00e-102	363.00
IUUC-Dor-030971	Dipodomys ordii	37.92	1.00e-92	333.00
IUUC-Dse-031563	Dothistroma septosporum	42.51	3.00e-104	371.00
IUUC-Dme-032161	Drosophila melanogaster	42.57	5.00e-114	404.00
IUUC-Ete-033127	Echinops telfairi	45.03	7.00e-120	423.00
IUUC-Eca-033531	Equus caballus	47.07	8.00e-123	432.00
IUUC-Eeu-034663	Erinaceus europaeus	43.05	3.00e-108	385.00
IUUC-Fca-036258	Felis catus	47.45	6.00e-131	459.00
IUUC-Fal-037456	Ficedula albicollis	47.89	1.00e-126	445.00
IUUC-Fox-038025	Fusarium oxysporum	41.23	6.00e-98	350.00
IUUC-Fso-038344	Fusarium solani	41.36	3.00e-93	335.00
IUUC-Gmo-039643	Gadus morhua	47.45	2.00e-127	448.00
IUUC-Ggr-039816	Gaeumannomyces graminis	41.63	1.00e-96	346.00
IUUC-Gga-040143	Gallus gallus	48.78	2.00e-129	455.00
IUUC-Gac-041665	Gasterosteus aculeatus	48.05	3.00e-131	461.00
IUUC-Gma-043073	Glycine max	80.53	0.00e+00	780.00
IUUC-Ggo-045058	Gorilla gorilla	47.45	3.00e-130	458.00
IUUC-Hsa-046843	Homo sapiens	47.45	8.00e-130	456.00
IUUC-Hvu-047654	Hordeum vulgare	70.65	1.00e-122	431.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	47.01	5.00e-130	457.00
IUUC-Kpa-049232	Komagataella pastoris	43.67	7.00e-121	426.00
IUUC-Lch-050542	Latimeria chalumnae	45.47	3.00e-131	461.00
IUUC-Lpe-051622	Leersia perrieri	78.98	0.00e+00	753.00
IUUC-Loc-052674	Lepisosteus oculatus	47.25	1.00e-134	472.00
IUUC-Lma-053108	Leptosphaeria maculans	42.16	7.00e-105	373.00
IUUC-Laf-053385	Loxodonta africana	47.23	3.00e-128	451.00
IUUC-Mcc-055151	Macaca mulatta	47.45	3.00e-130	457.00
IUUC-Meu-056230	Macropus eugenii	41.86	2.00e-53	202.00
IUUC-Mor-057013	Magnaporthe oryzae	40.50	4.00e-94	337.00
IUUC-Mpo-057530	Magnaporthe poae	41.86	3.00e-97	348.00
IUUC-Mtr-058187	Medicago truncatula	80.31	0.00e+00	758.00
IUUC-Mla-058964	Melampsora laricipopulina	36.55	3.00e-88	318.00
IUUC-Mga-059712	Meleagris gallopavo	48.03	3.00e-121	427.00
IUUC-Mvi-060370	Microbotryum violaceum	40.00	3.00e-70	258.00
IUUC-Mmr-061340	Microcebus murinus	45.03	9.00e-120	423.00
IUUC-Mdo-062978	Monodelphis domestica	47.67	2.00e-131	461.00
IUUC-Mmu-063439	Mus musculus	47.67	4.00e-131	460.00
IUUC-Mac-065129	Musa acuminata	81.11	0.00e+00	791.00
IUUC-Mpu-066548	Mustela putorius furo	42.20	4.00e-95	340.00
IUUC-Mlu-067660	Myotis lucifugus	47.01	6.00e-130	456.00
IUUC-Nfi-068455	Neosartorya fischeri	43.33	7.00e-107	380.00
IUUC-Ncr-068848	Neurospora crassa	39.17	6.00e-95	340.00
IUUC-Nle-069923	Nomascus leucogenys	47.45	7.00e-130	457.00
IUUC-Opr-070279	Ochotona princeps	39.68	3.00e-37	148.00
IUUC-Ont-072234	Oreochromis niloticus	48.21	1.00e-134	472.00
IUUC-Oan-073713	Ornithorhynchus anatinus	39.50	1.00e-44	172.00
IUUC-Ocu-073782	Oryctolagus cuniculus	47.45	1.00e-130	458.00
IUUC-Oba-075161	Oryza barthii	78.98	0.00e+00	754.00
IUUC-Obr-076868	Oryza brachyantha	78.98	0.00e+00	752.00
IUUC-Ogl-077062	Oryza glaberrima	78.98	0.00e+00	754.00
IUUC-Ogu-078308	Oryza glumaepatula	78.98	0.00e+00	753.00
IUUC-Oin-079378	Oryza indica	78.98	0.00e+00	753.00
IUUC-Olo-080638	Oryza longistaminata	75.88	0.00e+00	713.00
IUUC-Oni-082368	Oryza nivara	78.98	0.00e+00	753.00
IUUC-Opu-083628	Oryza punctata	78.98	0.00e+00	753.00
IUUC-Oru-085226	Oryza rufipogon	78.76	0.00e+00	751.00
IUUC-Osa-085368	Oryza sativa	76.01	9.00e-128	448.00
IUUC-Ola-086836	Oryzias latipes	47.23	7.00e-132	463.00
IUUC-Olu-087755	Ostreococcus lucimarinus	55.38	2.00e-149	521.00
IUUC-Oga-088170	Otolemur garnettii	47.23	1.00e-130	458.00
IUUC-Oar-089388	Ovis aries	47.67	4.00e-131	460.00
IUUC-Ptr-090494	Pan troglodytes	47.45	7.00e-130	457.00
IUUC-Pan-091697	Papio anubis	47.45	3.00e-130	458.00
IUUC-Psi-093916	Pelodiscus sinensis	45.90	7.00e-123	433.00
IUUC-Pno-095004	Phaeosphaeria nodorum	41.19	9.00e-99	353.00
IUUC-Ppa-095514	Physcomitrella patens	66.59	0.00e+00	665.00
IUUC-Pfo-097432	Poecilia formosa	50.11	5.00e-132	463.00
IUUC-Pab-098423	Pongo abelii	47.67	6.00e-131	459.00
IUUC-Pca-100365	Procavia capensis	45.23	2.00e-119	422.00
IUUC-Ppe-101350	Prunus persica	79.96	0.00e+00	773.00
IUUC-Pva-102845	Pteropus vampyrus	47.67	2.00e-128	452.00
IUUC-Pgr-103469	Puccinia graminis	38.39	3.00e-67	248.00
IUUC-Ptt-103980	Puccinia triticina	38.21	7.00e-66	244.00
IUUC-Pte-104111	Pyrenophora teres	41.94	4.00e-100	357.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	41.72	1.00e-99	356.00
IUUC-Rno-105082	Rattus norvegicus	47.45	3.00e-131	461.00
IUUC-Sce-106340	Saccharomyces cerevisiae	43.07	1.00e-112	399.00
IUUC-Sha-106584	Sarcophilus harrisii	47.89	2.00e-131	461.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	45.43	2.00e-107	381.00
IUUC-Spo-108046	Schizosaccharomyces pombe	46.77	3.00e-114	404.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	42.43	7.00e-104	370.00
IUUC-Smo-109548	Selaginella moellendorffii	66.00	0.00e+00	650.00
IUUC-Sit-110242	Setaria italica	77.26	0.00e+00	733.00
IUUC-Sly-111762	Solanum lycopersicum	81.19	0.00e+00	770.00
IUUC-Stu-112156	Solanum tuberosum	81.42	0.00e+00	774.00
IUUC-Sbi-114104	Sorghum bicolor	76.55	0.00e+00	731.00
IUUC-Sre-114951	Sporisorium reilianum	41.15	2.00e-107	382.00
IUUC-Ssc-115510	Sus scrofa	47.45	3.00e-130	457.00
IUUC-Tgu-117234	Taeniopygia guttata	47.76	3.00e-118	417.00
IUUC-Tru-117986	Takifugu rubripes	47.35	9.00e-128	449.00
IUUC-Tsy-119252	Tarsius syrichta	47.13	4.00e-119	421.00
IUUC-Tni-119785	Tetraodon nigroviridis	49.06	6.00e-126	443.00
IUUC-Tca-121222	Theobroma cacao	87.39	0.00e+00	813.00
IUUC-Tre-122243	Trichoderma reesei	40.50	2.00e-95	342.00
IUUC-Tvi-122293	Trichoderma virens	42.11	9.00e-98	350.00
IUUC-Tae-125191	Triticum aestivum	74.78	0.00e+00	712.00
IUUC-Tur-126098	Triticum urartu	71.67	0.00e+00	656.00
IUUC-Tme-127200	Tuber melanosporum	46.80	2.00e-123	435.00
IUUC-Tbe-127568	Tupaia belangeri	43.78	3.00e-57	215.00
IUUC-Ttr-129185	Tursiops truncatus	42.35	3.00e-107	381.00
IUUC-Uma-129353	Ustilago maydis	41.58	2.00e-107	382.00
IUUC-Vda-129768	Verticillium dahliae	39.86	7.00e-91	327.00
IUUC-Vpa-130572	Vicugna pacos	47.45	2.00e-129	455.00
IUUC-Vvi-131555	Vitis vinifera	88.05	0.00e+00	824.00
IUUC-Xtr-132263	Xenopus tropicalis	47.44	3.00e-106	377.00
IUUC-Xma-133925	Xiphophorus maculatus	50.11	5.00e-132	463.00
IUUC-Yli-134384	Yarrowia lipolytica	45.87	3.00e-114	404.00
IUUC-Zma-135616	Zea mays	76.33	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence