iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099578

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_583858; POPTR_0017s13440g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s13440	POPTR_0017s13440.1	POPTR_0017s13440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-08	34.8	198	238

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+++  +d+ + + C H+fh+ C++ w        ++++CP+C
   Q: 198  CPTCLDEYtpEDPKIMTKCSHHFHLGCIYEW------MERSDSCPVC 238
           ******998888444588*************......********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MCKRILLDAY GQIAVASEIG TDTMGSVCCC LHVDDFEDYM NPENSEYRNC LCLSCFVQNF 60
LHVYTSIFRR GQVHSVPSSI QGAASLTSSS LDNSLAEMYR SPPRPLPYDA DPRCLRLQRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAATCTCA ACGGGTTGTC TTTCATTTTA ATGATCCATG TCTGTTTTTG TGTTGACCCT 60
GTTGTTTTCA CTTGGTTTTT TGATGGGTTT TGGACGTAAT TGAGAAAGTT TTTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000479	Aegilops tauschii	48.66	7.00e-39	152.00
IUUC-Aly-005611	Arabidopsis lyrata	51.77	5.00e-65	239.00
IUUC-Ath-007679	Arabidopsis thaliana	58.33	5.00e-65	240.00
IUUC-Bol-016572	Brassica oleracea	59.31	2.00e-73	267.00
IUUC-Bra-017888	Brassica rapa	59.56	6.00e-70	256.00
IUUC-Gga-041213	Gallus gallus	44.23	2.00e-07	49.30
IUUC-Gma-043590	Glycine max	78.76	1.00e-105	374.00
IUUC-Lpe-051120	Leersia perrieri	50.75	4.00e-47	182.00
IUUC-Mtr-058320	Medicago truncatula	72.25	8.00e-91	325.00
IUUC-Mac-064735	Musa acuminata	55.07	1.00e-65	242.00
IUUC-Oba-075895	Oryza barthii	48.02	2.00e-50	191.00
IUUC-Oni-082343	Oryza nivara	46.19	7.00e-49	186.00
IUUC-Opu-083596	Oryza punctata	47.73	8.00e-47	179.00
IUUC-Ppa-095272	Physcomitrella patens	35.54	2.00e-36	144.00
IUUC-Ppe-101573	Prunus persica	79.74	1.00e-102	364.00
IUUC-Sly-111198	Solanum lycopersicum	67.70	3.00e-82	297.00
IUUC-Stu-112362	Solanum tuberosum	42.78	1.00e-36	146.00
IUUC-Tca-121439	Theobroma cacao	77.88	1.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence