iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099573

Ensembl Protein ID

POPTR_0018s02090.1

UniProt Accession

B9ING1; B9ING1_POPTR

Genbank Protein ID

EEF02718.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTR_0018s02090g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s02090	POPTR_0018s02090.1	POPTR_0018s02090.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-23	82.3	808	839
UBD/Beta-Prp	8.30e-42	144.5	312	572

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+ +v++laf +d +llvs++ D +i vW++
   Q: 808  GHSKRVSGLAFsNDlNLLVSSGADAQIFVWNV 839
           8***********99****************97 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkg 92
           ++++  ++ v++sp++ l+ +++  + ++++++ + k      ++  h ++v++++fs  +k  + +t+++D+++k wd  +g  ++t++g
   Q: 312  KDPSVSVNRVAWSPEGGLFGVAYSKHLVQIYSYNEAKDarqQLEIDAHVGGVNDLTFSAPEKqlLVITCGDDKIVKAWDATDGVKMYTFEG 402
           5556677889**********************998776555555699***********988888999************************ PP
   S: 93   hedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltggh 179
           h++ v+sl  +   + +++ ++s    i+vw  ++     + +++  g ++++ + +    ++  sGs  +++  Wd + g + rt  g +
   Q: 403  HDAPVYSLCPYSkgNVHFVFATSVNGNIKVWLYDNLGARVDYDAPGLGCTSMAYSGDRRlfSCGTSGSGESFLVEWDDSEGAIKRTYLGLQ 493
           *******7655535558888889999*****99998888889999999988876666555455579999******************9999 PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriWdlrsgdllk 258
           ++s   ++fd  +++++++++   +k+wd+ + e   t  +    +   +vrf +++++l++ + D+ i+i    ++  l+
   Q: 494  KNSSSVVQFDIMKNQVLAAGDEHVIKIWDMNKIELFTTIDAEGGLPAnpCVRFNKEGTLLAVSANDNKIKIL--AKDGSLQ 572
           99999999**999******************9999888888775543338*******************994..4444444 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAALCKDLVL LISQFLDEEG FKETARMLER ESGYYFSMKF FEDMIRSGNW DEAERYLSCF 60
TKLDDNRYST KIYFEIRKQK FLEVLDNNER SKALDILMKD LKAFAPDNEE LLKEMTLLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCTC TCTGTAAAGA TCTTGTCCTG TTAATCTCAC AGTTCTTAGA CGAGGAAGGG 60
TTCAAAGAAA CTGCTCGCAT GTATGTTACT TTCTCCTTCT CTCTCTAACA CACACAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

pop:POPTR_0018s02090g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence