iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099134

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_835833; POPTR_0018s02430g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s02430	POPTR_0018s02430.1	POPTR_0018s02430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-41	137.4	506	544
UBD/Beta-Prp	5.30e-67	227.2	349	666

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v cl++  +++++++Gs D+t+++WD+ +g +++
   Q: 506  GHLSDVDCLQWhaNCNYIATGSSDKTVRLWDVQSGECVR 544
           8***********766*********************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........................lrsl.sgheaevtavkfspdgk 65
           +++++h+   ++c  +s d+sl+a g+ d+++kvwd+ +                                +l +gh+++v + +fsp g+
   Q: 349  TFINTHNG--LNCSSISHDGSLIAGGFSDSSLKVWDMAKLGHqagnsilqgendtapseqgqspnsgkrSYTLfQGHSGPVHSATFSPLGD 437
           55666666..55666777*******************9955599***********************9966666***************** PP
   S: 66   ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGs 156
           +++++s D t+++w+ + +  ++ +kgh++ v++++fsp g++++s+shdrt+r+w ++  q l+ + +gh + v c+++h ++n++++Gs
   Q: 438  FILSSSADTTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVGQYFASASHDRTARIWSMDRIQPLR-IMAGHLSDVDCLQWHANCNYIATGS 527
           *****************************************************************.************************* PP
   S: 157  lDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsir 247
            D+tvrlWd+++g+++r + g h +++ sl+++++g++++s+++dgt+ +wdl++g+c+  l+gh++ v+s++fs ++ +l+sgs+D +++
   Q: 528  SDKTVRLWDVQSGECVRIFIG-HRSMILSLAMSPDGRYMASADEDGTIMMWDLSSGRCISPLIGHNSCVWSLAFSCEGSLLASGSADCTVK 617
           ********************9.********************************************************************* PP
   S: 248  iWdlrsgdllktlqlhn..............ssvisvavlsfgdnvlvl 282
           +Wd+++++    ++ ++              +++++v +l+f++++l+ 
   Q: 618  LWDVTTSTKAPRTEESKsgntnrlrllktlpTKSTPVYTLRFSRRNLLF 666
           ******9999999999999999999999999999999999999877754 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDEEAVVKFV ETYLKKKGFK QAELAFHEEI QQQHQQQNNS NNAISIHSDP DLSSLLHSLS 60
QPEDSPARYQ DEYSKLRSWA YSSLDLYKHE LLRVLYPVFV HCYMDIVAKG HIQEARNFFN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAAAGCTT CGACCAGGAA GCAAGCGAGA AAGAAGAGAG ATGCGTGCTT CATTTTGAAG 60
AAGATAAAGA AGGGCCACGT TGCCTTGGTC TTTTACTTGA AGAAGAAGAG GAGGAGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0018s02430g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	62.05	0.00e+00	714.00
IUUC-Bdi-015041	Brachypodium distachyon	68.93	0.00e+00	846.00
IUUC-Cel-018451	Caenorhabditis elegans	35.47	5.00e-57	215.00
IUUC-Cho-024638	Choloepus hoffmanni	40.76	8.00e-77	280.00
IUUC-Cme-027302	Cyanidioschyzon merolae	35.87	8.00e-111	394.00
IUUC-Ete-032712	Echinops telfairi	40.49	1.00e-74	273.00
IUUC-Ggo-044568	Gorilla gorilla	40.65	1.00e-75	277.00
IUUC-Hvu-047695	Hordeum vulgare	73.01	0.00e+00	658.00
IUUC-Kpa-049402	Komagataella pastoris	43.67	1.00e-88	320.00
IUUC-Lpe-051560	Leersia perrieri	67.02	0.00e+00	869.00
IUUC-Meu-056182	Macropus eugenii	40.92	3.00e-74	272.00
IUUC-Mtr-058754	Medicago truncatula	77.15	0.00e+00	1055.00
IUUC-Mvi-060208	Microbotryum violaceum	31.10	5.00e-87	315.00
IUUC-Opr-070243	Ochotona princeps	40.65	4.00e-76	278.00
IUUC-Oba-075739	Oryza barthii	65.66	0.00e+00	782.00
IUUC-Obr-076111	Oryza brachyantha	69.49	0.00e+00	925.00
IUUC-Ogl-077914	Oryza glaberrima	68.93	0.00e+00	867.00
IUUC-Ogu-078057	Oryza glumaepatula	62.50	0.00e+00	728.00
IUUC-Oin-079473	Oryza indica	70.18	0.00e+00	877.00
IUUC-Olo-080645	Oryza longistaminata	73.68	4.00e-126	444.00
IUUC-Ome-081831	Oryza meridionalis	62.50	0.00e+00	728.00
IUUC-Oni-082431	Oryza nivara	62.48	0.00e+00	829.00
IUUC-Opu-083239	Oryza punctata	59.86	0.00e+00	738.00
IUUC-Oru-085131	Oryza rufipogon	63.70	0.00e+00	740.00
IUUC-Osa-086189	Oryza sativa	69.88	0.00e+00	873.00
IUUC-Ppa-095455	Physcomitrella patens	57.89	0.00e+00	736.00
IUUC-Pca-100727	Procavia capensis	41.03	5.00e-75	275.00
IUUC-Pva-103211	Pteropus vampyrus	40.21	3.00e-75	275.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.55	5.00e-79	288.00
IUUC-Sce-106186	Saccharomyces cerevisiae	32.53	4.00e-100	358.00
IUUC-Smo-109097	Selaginella moellendorffii	58.74	0.00e+00	711.00
IUUC-Sit-109804	Setaria italica	69.58	0.00e+00	919.00
IUUC-Sar-113381	Sorex araneus	41.30	3.00e-78	285.00
IUUC-Sre-114945	Sporisorium reilianum	40.35	6.00e-77	281.00
IUUC-Tsy-119622	Tarsius syrichta	32.79	6.00e-49	188.00
IUUC-Tae-123335	Triticum aestivum	67.86	0.00e+00	846.00
IUUC-Tme-126904	Tuber melanosporum	33.61	1.00e-105	376.00
IUUC-Uma-129379	Ustilago maydis	46.47	3.00e-74	273.00
IUUC-Xtr-132241	Xenopus tropicalis	39.46	3.00e-73	269.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence