iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112197

Ensembl Protein ID

PGSC0003DMT400070604

UniProt Accession

M1CMF0; M1CMF0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400027445	PGSC0003DMT400070604	PGSC0003DMT400070604

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.20e-08	33.7	69	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle fkdg   + lp CgH+fh +C+  w       ++  +CP+Cr
   Q: 69   CAICLEGFKDGefCRKLPdCGHLFHVKCVDSW------LMRVLNCPICR 111
           ********99977778889*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MALFLSLFLI FLLFLGFAAL VLLHFLITST AFHRRHRRRH HHRFPANQTS SFDLPCVSYC 60
VSQQSVRDCA ICLEGFKDGE FCRKLPDCGH LFHVKCVDSW LMRVLNCPIC RTRVRVDSGN 120

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Nucleotide Sequence
(Fasta)

GTTTTCATGA TTTGAACTCG TAAAACCATA AACTATGGGC CATTATTAGT GGCATATCCC 60
CTTAGCATCT CTCCTCATCC CTTCTTCCCA ACAAACCGAC AAACCATAGC TGATCCGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006633	Arabidopsis thaliana	52.86	3.00e-17	79.70
IUUC-Bol-015094	Brassica oleracea	58.82	1.00e-16	78.20
IUUC-Bra-017657	Brassica rapa	55.56	6.00e-17	79.30
IUUC-Mtr-058539	Medicago truncatula	48.05	1.00e-16	78.20
IUUC-Pop-099663	Populus trichocarpa	52.38	4.00e-16	76.30
IUUC-Ppe-101566	Prunus persica	51.43	9.00e-19	85.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence