iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121196

Ensembl Protein ID

EOY31615

UniProt Accession

A0A061GP43; A0A061GP43_THECC

Genbank Protein ID

EOY31615.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001887

Gene Name

TCM_038587

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038587	EOY31615	EOY31615

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.3	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..pl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+ fk+g   + ++ CgH+fh++Cl  w        k   CP+Cr
   Q: 102  CVICLDGFKQGqwCRnLVMCGHLFHRKCLDTW------LTKVGACPICR 144
           ********77663221234*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLPPPHDSYR GGSLPPPSKS KDKFLSLILK AIIMMILISF FFLLLPLASG LLLLPLLLRH 60
QHHRHRRHSR LSTGFSAKQL KKLPQFKFSE GTRTAHLESD SCVICLDGFK QGQWCRNLVM 120

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Nucleotide Sequence
(Fasta)

TGTCATTATT GTAAATATCT AAAGCCACGC TCCCCTCTCT CCAATAAATT TGTCTCTTCT 60
CTATATACCA CAACCACCCC CAGTTCTTCC AACAAACTCA ATCTAAAAAA AAAGAACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006401	Arabidopsis lyrata	60.64	4.00e-27	113.00
IUUC-Ath-007060	Arabidopsis thaliana	56.70	5.00e-27	113.00
IUUC-Bol-015094	Brassica oleracea	63.51	5.00e-24	102.00
IUUC-Bra-017657	Brassica rapa	48.59	7.00e-27	112.00
IUUC-Mtr-058539	Medicago truncatula	52.56	8.00e-22	95.90
IUUC-Pop-099663	Populus trichocarpa	58.97	3.00e-22	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence