iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgpl..vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++ g+    lpC Hvfh+dC+  w       +k+ +CP+Cr
   Q: 174  CPICLTELSSGVSrmKLPCSHVFHRDCIMTW------LKKNPSCPICR 215
           ********6653322499*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKNSYKHELI STSTNETDRV INRCFLRKKT TKEVIHLKAS QVESDSYSFI VTYQPNLRIR 60
HENLDGHQLK TTLERHPDRV FKLEDNIPKQ FLVSQETCLE HVMIILSAMY LPQTIQERLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGGTTTT TGGTCTAGTT CCTCTGGTTC ATACCACACC AACCATGAAG AACAGCTACA 60
AGCATGAACT CATCTCAACC TCAACGAACG AAACTGATCG AGTCATTAAT CGTTGCTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G54990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005630	Arabidopsis lyrata	86.34	3.00e-104	370.00
IUUC-Pop-098847	Populus trichocarpa	51.72	4.00e-12	63.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence