iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016906

Ensembl Protein ID

Bra004687.1-P

UniProt Accession

M4CKF2; M4CKF2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra004687	Bra004687.1	Bra004687.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.5	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +  +d  + lp C+Hvfh dC+ kw           +CP+Cr
   Q: 105  CAVCLSLLeeQDTARELPsCKHVFHVDCVDKW------LTACSTCPVCR 147
           ****999955333777778*************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSDNRDHYW FNGHGHHSFW PNPSTYDRNS KIMLAAVVSL SAVILFVFIL HLYARFVLRR 60
RRETFRGLPV VVRHPFQTPK RGLDPTLIAS LPSFTVRDVA SATECAVCLS LLEEQDTARE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTCCG ACAATAGAGA TCATTACTGG TTCAACGGTC ATGGACACCA CTCCTTCTGG 60
CCTAACCCTT CTACTTATGA CCGCAACAGC AAGATCATGC TCGCAGCAGT CGTCTCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005547	Arabidopsis lyrata	67.63	1.00e-72	265.00
IUUC-Ath-007071	Arabidopsis thaliana	68.88	4.00e-72	263.00
IUUC-Bol-016176	Brassica oleracea	93.70	5.00e-97	346.00
IUUC-Gma-044362	Glycine max	50.31	2.00e-28	118.00
IUUC-Oba-075575	Oryza barthii	39.33	2.00e-23	102.00
IUUC-Ogl-077104	Oryza glaberrima	39.33	2.00e-23	102.00
IUUC-Oin-079390	Oryza indica	39.33	2.00e-23	102.00
IUUC-Oni-082882	Oryza nivara	39.33	2.00e-23	102.00
IUUC-Oru-084452	Oryza rufipogon	39.33	3.00e-23	101.00
IUUC-Osa-085457	Oryza sativa	39.33	3.00e-23	101.00
IUUC-Pop-098962	Populus trichocarpa	51.28	3.00e-30	124.00
IUUC-Ppe-101543	Prunus persica	52.33	3.00e-36	144.00
IUUC-Sly-111845	Solanum lycopersicum	41.03	3.00e-34	137.00
IUUC-Stu-112253	Solanum tuberosum	45.54	5.00e-42	163.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence