iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pte-104029

Ensembl Protein ID

EFQ87362

UniProt Accession

E3S3T4; E3S3T4_PYRTT

Genbank Protein ID

EFQ87362.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

GL537047

Gene Name

ERB1; PTT_17168

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTT_17168	EFQ87362	EFQ87362

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-13	49.8	431	467

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtll.vsGsdDgtikvWDlrtgvl 35
           g++++v+c++  +++++ +sG+dDg +++W+l tg++
   Q: 431  GQEGRVRCVSIdPNGIFvASGGDDGYVRIWELLTGRQ 467
           57899******977775499************99987 PP

Organism

Pyrenophora teres

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MSVNPRKRKV VTRPAPEPSD SEGELGDGLL EGILSHSEDD SDDSQEEDVD TDASSVIEGL 60
SDEEEEEEED SDAEQIRTEM RNLNTSDGPL RKKNGVPTHD MDLDTAATEE LEDDEDLKPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGTTA ACCCGCGCAA GAGGAAGGTC GTGACGCGCC CGGCGCCAGA GCCTAGTGAT 60
TCCGAAGGTG AATTAGGCGA CGGCTTGCTC GAGGGCATTC TGTCGCATTC CGAGGACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pte:PTT_17168

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	37.36	8.00e-102	362.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.44	9.00e-125	439.00
IUUC-Atr-003141	Amborella trichopoda	36.65	7.00e-69	253.00
IUUC-Apl-003545	Anas platyrhynchos	40.14	2.00e-119	421.00
IUUC-Aly-005649	Arabidopsis lyrata	41.29	3.00e-135	474.00
IUUC-Ath-007625	Arabidopsis thaliana	41.29	2.00e-128	451.00
IUUC-Ago-007958	Ashbya gossypii	52.68	0.00e+00	726.00
IUUC-Acl-008344	Aspergillus clavatus	64.99	0.00e+00	848.00
IUUC-Afl-008616	Aspergillus flavus	65.75	0.00e+00	882.00
IUUC-Afu-009083	Aspergillus fumigatus	65.40	0.00e+00	823.00
IUUC-Ani-009365	Aspergillus nidulans	65.09	0.00e+00	863.00
IUUC-Ang-009796	Aspergillus niger	64.38	0.00e+00	875.00
IUUC-Aor-010015	Aspergillus oryzae	65.75	0.00e+00	881.00
IUUC-Ate-010537	Aspergillus terreus	64.93	0.00e+00	907.00
IUUC-Ame-011767	Astyanax mexicanus	50.42	2.00e-66	243.00
IUUC-Bgr-012286	Blumeria graminis	68.66	0.00e+00	942.00
IUUC-Bta-013569	Bos taurus	42.34	8.00e-139	486.00
IUUC-Bci-013820	Botrytis cinerea	63.79	0.00e+00	926.00
IUUC-Bdi-014477	Brachypodium distachyon	39.97	7.00e-130	456.00
IUUC-Bol-016099	Brassica oleracea	40.97	2.00e-134	471.00
IUUC-Bra-017174	Brassica rapa	41.03	4.00e-135	474.00
IUUC-Cel-018201	Caenorhabditis elegans	38.97	4.00e-117	413.00
IUUC-Cja-019009	Callithrix jacchus	42.74	2.00e-83	301.00
IUUC-Cfa-020173	Canis familiaris	38.76	1.00e-123	435.00
IUUC-Cpo-021796	Cavia porcellus	42.34	8.00e-138	482.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	42.20	1.00e-121	428.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.65	1.00e-144	505.00
IUUC-Cin-025782	Ciona intestinalis	43.69	2.00e-149	521.00
IUUC-Csv-026352	Ciona savignyi	41.27	1.00e-139	488.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	60.60	0.00e+00	753.00
IUUC-Cne-027004	Cryptococcus neoformans	48.31	6.00e-180	622.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.49	7.00e-108	382.00
IUUC-Dre-028658	Danio rerio	43.14	1.00e-146	512.00
IUUC-Dno-028883	Dasypus novemcinctus	42.65	5.00e-139	486.00
IUUC-Dor-031031	Dipodomys ordii	41.86	5.00e-141	493.00
IUUC-Dse-031443	Dothistroma septosporum	61.95	0.00e+00	834.00
IUUC-Dme-031786	Drosophila melanogaster	41.64	1.00e-146	511.00
IUUC-Eca-033677	Equus caballus	41.86	7.00e-138	482.00
IUUC-Eeu-035310	Erinaceus europaeus	38.88	1.00e-104	371.00
IUUC-Fca-035888	Felis catus	42.02	6.00e-140	489.00
IUUC-Fal-037438	Ficedula albicollis	42.91	9.00e-115	405.00
IUUC-Fox-037973	Fusarium oxysporum	66.72	0.00e+00	921.00
IUUC-Fso-038187	Fusarium solani	67.46	0.00e+00	932.00
IUUC-Gmo-039114	Gadus morhua	39.53	1.00e-130	458.00
IUUC-Ggr-039746	Gaeumannomyces graminis	66.03	0.00e+00	940.00
IUUC-Gga-040631	Gallus gallus	41.81	4.00e-80	289.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.11	1.00e-138	485.00
IUUC-Gma-044215	Glycine max	42.48	7.00e-137	479.00
IUUC-Ggo-045587	Gorilla gorilla	42.65	1.00e-144	504.00
IUUC-Hsa-046319	Homo sapiens	42.50	1.00e-144	505.00
IUUC-Hvu-047526	Hordeum vulgare	39.38	3.00e-123	434.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	41.86	3.00e-139	487.00
IUUC-Kpa-049221	Komagataella pastoris	48.31	0.00e+00	672.00
IUUC-Lch-049640	Latimeria chalumnae	42.64	6.00e-152	529.00
IUUC-Lpe-051135	Leersia perrieri	40.17	4.00e-66	244.00
IUUC-Loc-051930	Lepisosteus oculatus	43.44	5.00e-151	526.00
IUUC-Lma-053290	Leptosphaeria maculans	86.33	0.00e+00	1272.00
IUUC-Laf-053903	Loxodonta africana	38.64	1.00e-118	418.00
IUUC-Mcc-055471	Macaca mulatta	42.50	7.00e-145	506.00
IUUC-Meu-056190	Macropus eugenii	43.44	7.00e-145	506.00
IUUC-Mor-057135	Magnaporthe oryzae	68.50	0.00e+00	912.00
IUUC-Mpo-057475	Magnaporthe poae	65.01	0.00e+00	905.00
IUUC-Mtr-058689	Medicago truncatula	39.04	1.00e-119	422.00
IUUC-Mla-059149	Melampsora laricipopulina	49.70	0.00e+00	627.00
IUUC-Mga-059645	Meleagris gallopavo	37.60	1.00e-45	174.00
IUUC-Mvi-060485	Microbotryum violaceum	46.28	6.00e-159	553.00
IUUC-Mmr-061674	Microcebus murinus	41.71	1.00e-136	478.00
IUUC-Mdo-062973	Monodelphis domestica	42.97	3.00e-150	523.00
IUUC-Mmu-064180	Mus musculus	42.18	7.00e-144	502.00
IUUC-Mac-064535	Musa acuminata	37.56	2.00e-79	288.00
IUUC-Mpu-066406	Mustela putorius furo	41.86	2.00e-141	494.00
IUUC-Mlu-067795	Myotis lucifugus	42.50	1.00e-132	465.00
IUUC-Nfi-068516	Neosartorya fischeri	63.01	0.00e+00	798.00
IUUC-Ncr-068767	Neurospora crassa	66.32	0.00e+00	858.00
IUUC-Opr-071084	Ochotona princeps	38.98	6.00e-52	196.00
IUUC-Ont-071614	Oreochromis niloticus	42.83	6.00e-150	522.00
IUUC-Oba-075980	Oryza barthii	41.21	2.00e-66	245.00
IUUC-Obr-076799	Oryza brachyantha	41.04	2.00e-130	457.00
IUUC-Ogl-077134	Oryza glaberrima	41.04	8.00e-125	439.00
IUUC-Ogu-078655	Oryza glumaepatula	39.47	8.00e-116	409.00
IUUC-Oin-079654	Oryza indica	40.79	9.00e-125	439.00
IUUC-Olo-080706	Oryza longistaminata	41.21	2.00e-66	245.00
IUUC-Ome-081716	Oryza meridionalis	41.21	1.00e-66	246.00
IUUC-Oni-082508	Oryza nivara	38.21	6.00e-111	393.00
IUUC-Opu-083707	Oryza punctata	40.75	3.00e-66	244.00
IUUC-Oru-084453	Oryza rufipogon	41.21	2.00e-66	245.00
IUUC-Osa-085811	Oryza sativa	40.88	2.00e-124	438.00
IUUC-Ola-087361	Oryzias latipes	44.03	1.00e-149	521.00
IUUC-Oga-088015	Otolemur garnettii	41.71	6.00e-145	506.00
IUUC-Oar-090058	Ovis aries	50.00	4.00e-47	181.00
IUUC-Ptr-090631	Pan troglodytes	39.48	2.00e-56	211.00
IUUC-Pan-092306	Papio anubis	42.59	1.00e-143	501.00
IUUC-Pma-094622	Petromyzon marinus	44.55	8.00e-155	538.00
IUUC-Pno-094794	Phaeosphaeria nodorum	79.05	0.00e+00	1192.00
IUUC-Ppa-095528	Physcomitrella patens	35.51	9.00e-74	269.00
IUUC-Pfo-096682	Poecilia formosa	42.79	2.00e-152	531.00
IUUC-Pab-097939	Pongo abelii	42.76	1.00e-129	454.00
IUUC-Pop-099043	Populus trichocarpa	41.59	3.00e-123	434.00
IUUC-Pca-100333	Procavia capensis	41.23	2.00e-137	481.00
IUUC-Ppe-102078	Prunus persica	41.71	1.00e-128	451.00
IUUC-Pgr-103525	Puccinia graminis	49.09	7.00e-166	575.00
IUUC-Ptt-103929	Puccinia triticina	48.60	2.00e-159	555.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	98.46	0.00e+00	1459.00
IUUC-Rno-105248	Rattus norvegicus	42.34	6.00e-144	503.00
IUUC-Sce-106381	Saccharomyces cerevisiae	51.18	0.00e+00	723.00
IUUC-Sha-106519	Sarcophilus harrisii	43.76	8.00e-151	525.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	44.60	6.00e-154	536.00
IUUC-Spo-108071	Schizosaccharomyces pombe	47.16	2.00e-163	567.00
IUUC-Smo-109604	Selaginella moellendorffii	41.35	2.00e-115	408.00
IUUC-Sit-110551	Setaria italica	41.29	1.00e-128	452.00
IUUC-Sly-110970	Solanum lycopersicum	43.64	2.00e-69	254.00
IUUC-Stu-112593	Solanum tuberosum	42.88	3.00e-135	473.00
IUUC-Sar-113123	Sorex araneus	46.69	4.00e-58	216.00
IUUC-Sbi-113945	Sorghum bicolor	40.06	7.00e-129	452.00
IUUC-Sre-115188	Sporisorium reilianum	44.72	7.00e-162	562.00
IUUC-Ssc-115352	Sus scrofa	42.81	1.00e-140	491.00
IUUC-Tru-117685	Takifugu rubripes	43.23	9.00e-151	525.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.65	3.00e-145	506.00
IUUC-Tca-121664	Theobroma cacao	41.29	5.00e-135	473.00
IUUC-Tre-122229	Trichoderma reesei	66.52	0.00e+00	822.00
IUUC-Tvi-122576	Trichoderma virens	66.12	0.00e+00	828.00
IUUC-Tae-124110	Triticum aestivum	39.63	2.00e-116	411.00
IUUC-Tur-126781	Triticum urartu	37.19	1.00e-97	349.00
IUUC-Tme-127080	Tuber melanosporum	64.71	0.00e+00	869.00
IUUC-Ttr-128514	Tursiops truncatus	37.83	9.00e-83	299.00
IUUC-Uma-129556	Ustilago maydis	44.98	9.00e-160	555.00
IUUC-Vda-129715	Verticillium dahliae	66.42	0.00e+00	910.00
IUUC-Vvi-131211	Vitis vinifera	40.10	3.00e-122	430.00
IUUC-Xma-133883	Xiphophorus maculatus	42.33	5.00e-147	513.00
IUUC-Yli-134438	Yarrowia lipolytica	51.40	0.00e+00	702.00
IUUC-Zma-135341	Zea mays	36.83	6.00e-119	419.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence