iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099625

Ensembl Protein ID

POPTR_0853s00200.1

UniProt Accession

U7DWJ6; U7DWJ6_POPTR

Genbank Protein ID

ERP46472.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KE703528

Gene Name

POPTR_0853s00200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0853s00200	POPTR_0853s00200.1	POPTR_0853s00200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-11	43.2	64	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tl....lvsGsdDgtikvWDlrtgvllks 38
           gH++ v  la+  ++ ++    +vsG+ D  + vW+l+ g +++s
   Q: 64   GHSSFVGPLAWipPNqDFvegaIVSGGMDTMVLVWNLSNGEKVQS 108
           79999999****94445556669***************9999886 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDMEIDFKNY QLSQELRGHE DDVRGICVCG NAGIATSSRD KTVRYWVPDP TDKRKYESSK 60
ILLGHSSFVG PLAWIPPNQD FVEGAIVSGG MDTMVLVWNL SNGEKVQSLK GHHLQVTGVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAACTAAAA ACAATCACTC TCCCCTCTCA CTCAAAGGTC TCTCAAAATC ATGGACATGG 60
AAATCGACTT CAAAAATTAT CAACTAAGCC AAGAACTCCG CGGCCACGAA GACGACGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033510--PLAA/Doa1/Lub1
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

pop:POPTR_0853s00200g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence