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Tag Content
UUCD2 ID IUUC-Ssc-115894
UUCD1 version UUC-SuS-00705
Ensembl Protein ID ENSSSCP00000017767.2
UniProt Accession F1SSB8; F1SSB8_PIG
Genbank Protein ID ENSSSCP00000017767
Protein Name Uncharacterized protein
Genbank Nucleotide ID CU640379
Gene Name VPS41
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000016772.2 ENSSSCT00000018259.2 ENSSSCP00000017767.2
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 95.78 0.00e+00 1652.00 IUUC-Hsa-047030
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sus scrofa
Protein Sequence
(Fasta)
MAEAEERETG SLEESTDESE EEESEEEPKL KYERLSNGVT EILQKDAASC MTVHDKFLAL 60
GTHYGKVYLL DVQGNITQKF DVSCVKINQI SLDESGEHMG VCSEDGKVQV FGLYSGEEFH 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-115894|E3,RING|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCAGCAAAA CACCTTCCGG CTCAGATGCT GCTAAAACTA CATTTCCCAG CAGGCGTCGG 60
ACCCCGGGCC CTGTTACTCA CTTCCGGGTG TGTCACGTGA CTCCCTGGCT GCGCCATGGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115894|E3,RING|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50236--CHCR
PS50089--ZF_RING_2
Pfam

PF00637--Clathrin
SMART

SM00299--CLH
Gene Ontology

GO:0033263--C:CORVET complex
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0051020--F:GTPase binding
GO:0008270--F:zinc ion binding
GO:0006623--P:protein targeting to vacuole
GO:0035542--P:regulation of SNARE complex assembly
GO:0042144--P:vacuole fusion, non-autophagic
GO:0016192--P:vesicle-mediated transport
KEGG ssc:100519233
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000207 Aegilops tauschii 34.62 4.00e-136 478.00
IUUC-Aml-001435 Ailuropoda melanoleuca 96.37 0.00e+00 1653.00
IUUC-Atr-002975 Amborella trichopoda 37.30 4.00e-163 568.00
IUUC-Apl-003254 Anas platyrhynchos 90.57 0.00e+00 1568.00
IUUC-Aca-005067 Anolis carolinensis 87.35 0.00e+00 1533.00
IUUC-Aly-005839 Arabidopsis lyrata 35.97 2.00e-159 556.00
IUUC-Ath-006625 Arabidopsis thaliana 35.86 2.00e-159 556.00
IUUC-Ago-007960 Ashbya gossypii 25.27 7.00e-70 258.00
IUUC-Acl-008174 Aspergillus clavatus 30.28 7.00e-56 213.00
IUUC-Afl-008524 Aspergillus flavus 41.67 2.00e-37 151.00
IUUC-Afu-009054 Aspergillus fumigatus 28.43 4.00e-57 216.00
IUUC-Ani-009250 Aspergillus nidulans 27.86 9.00e-48 185.00
IUUC-Ang-009665 Aspergillus niger 29.33 5.00e-57 216.00
IUUC-Aor-010230 Aspergillus oryzae 41.67 3.00e-37 150.00
IUUC-Ate-010464 Aspergillus terreus 41.18 2.00e-40 161.00
IUUC-Ame-011311 Astyanax mexicanus 66.47 0.00e+00 1120.00
IUUC-Bgr-012099 Blumeria graminis 25.41 1.00e-49 192.00
IUUC-Bta-013327 Bos taurus 96.25 0.00e+00 1661.00
IUUC-Bci-013660 Botrytis cinerea 27.56 2.00e-49 191.00
IUUC-Bdi-014641 Brachypodium distachyon 36.20 1.00e-147 517.00
IUUC-Bol-015685 Brassica oleracea 35.66 1.00e-158 553.00
IUUC-Bra-016918 Brassica rapa 35.29 3.00e-157 549.00
IUUC-Cel-018385 Caenorhabditis elegans 29.06 2.00e-93 337.00
IUUC-Cja-018994 Callithrix jacchus 95.27 0.00e+00 1635.00
IUUC-Cfa-020405 Canis familiaris 96.49 0.00e+00 1656.00
IUUC-Cpo-022163 Cavia porcellus 95.04 0.00e+00 1626.00
IUUC-Cre-022626 Chlamydomonas reinhardtii 27.50 6.00e-41 162.00
IUUC-Csa-023134 Chlorocebus sabaeus 96.02 0.00e+00 1653.00
IUUC-Cho-024913 Choloepus hoffmanni 84.84 0.00e+00 1365.00
IUUC-Cin-025239 Ciona intestinalis 44.32 0.00e+00 718.00
IUUC-Cgl-026706 Colletotrichum gloeosporioides 28.73 1.00e-51 198.00
IUUC-Cne-026799 Cryptococcus neoformans 36.45 5.00e-163 568.00
IUUC-Cme-027200 Cyanidioschyzon merolae 23.61 1.00e-08 55.50
IUUC-Dre-028115 Danio rerio 81.15 0.00e+00 1422.00
IUUC-Dor-030947 Dipodomys ordii 88.52 0.00e+00 1503.00
IUUC-Dse-031544 Dothistroma septosporum 28.14 7.00e-46 179.00
IUUC-Dme-031830 Drosophila melanogaster 37.64 8.00e-155 540.00
IUUC-Ete-033051 Echinops telfairi 91.47 2.00e-140 493.00
IUUC-Eca-033501 Equus caballus 96.25 0.00e+00 1655.00
IUUC-Eeu-034555 Erinaceus europaeus 91.76 0.00e+00 878.00
IUUC-Fca-035809 Felis catus 95.90 0.00e+00 1650.00
IUUC-Fal-037056 Ficedula albicollis 90.81 0.00e+00 1568.00
IUUC-Fox-037949 Fusarium oxysporum 27.85 2.00e-48 188.00
IUUC-Fso-038282 Fusarium solani 27.27 2.00e-45 178.00
IUUC-Gmo-038540 Gadus morhua 80.17 0.00e+00 1384.00
IUUC-Ggr-039733 Gaeumannomyces graminis 29.48 3.00e-52 200.00
IUUC-Gga-040446 Gallus gallus 90.63 0.00e+00 1573.00
IUUC-Gac-041462 Gasterosteus aculeatus 81.74 0.00e+00 1401.00
IUUC-Gma-043148 Glycine max 36.63 5.00e-164 571.00
IUUC-Hsa-047030 Homo sapiens 95.78 0.00e+00 1652.00
IUUC-Hvu-047693 Hordeum vulgare 36.20 2.00e-148 519.00
IUUC-Itr-048318 Ictidomys tridecemlineatus 95.95 0.00e+00 1625.00
IUUC-Kpa-049224 Komagataella pastoris 23.44 4.00e-56 213.00
IUUC-Lch-049444 Latimeria chalumnae 80.72 0.00e+00 1371.00
IUUC-Lpe-050942 Leersia perrieri 34.06 2.00e-129 456.00
IUUC-Loc-052260 Lepisosteus oculatus 80.35 0.00e+00 1411.00
IUUC-Lma-053173 Leptosphaeria maculans 27.16 2.00e-49 191.00
IUUC-Laf-054185 Loxodonta africana 95.53 0.00e+00 1641.00
IUUC-Mcc-054816 Macaca mulatta 95.78 0.00e+00 1652.00
IUUC-Meu-056483 Macropus eugenii 72.71 0.00e+00 644.00
IUUC-Mor-056979 Magnaporthe oryzae 27.62 4.00e-53 203.00
IUUC-Mpo-057312 Magnaporthe poae 29.57 7.00e-52 199.00
IUUC-Mtr-057630 Medicago truncatula 36.25 2.00e-160 559.00
IUUC-Mla-058930 Melampsora laricipopulina 30.94 5.00e-25 107.00
IUUC-Mga-059942 Meleagris gallopavo 90.46 0.00e+00 1559.00
IUUC-Mvi-060386 Microbotryum violaceum 35.24 5.00e-155 541.00
IUUC-Mmr-060640 Microcebus murinus 95.77 0.00e+00 1648.00
IUUC-Mdo-062934 Monodelphis domestica 84.99 0.00e+00 1407.00
IUUC-Mmu-063488 Mus musculus 94.68 0.00e+00 1641.00
IUUC-Mac-064975 Musa acuminata 37.19 7.00e-157 547.00
IUUC-Mpu-065777 Mustela putorius furo 96.49 0.00e+00 1657.00
IUUC-Mlu-068052 Myotis lucifugus 95.78 0.00e+00 1648.00
IUUC-Nfi-068436 Neosartorya fischeri 28.85 5.00e-57 216.00
IUUC-Ncr-068840 Neurospora crassa 29.51 1.00e-57 218.00
IUUC-Nle-070063 Nomascus leucogenys 95.43 0.00e+00 1642.00
IUUC-Opr-070385 Ochotona princeps 85.37 0.00e+00 1420.00
IUUC-Ont-072367 Oreochromis niloticus 80.35 0.00e+00 1389.00
IUUC-Oan-073085 Ornithorhynchus anatinus 89.98 0.00e+00 1544.00
IUUC-Ocu-074672 Oryctolagus cuniculus 96.13 0.00e+00 1651.00
IUUC-Oba-075574 Oryza barthii 36.77 1.00e-154 540.00
IUUC-Obr-076203 Oryza brachyantha 36.55 1.00e-153 537.00
IUUC-Ogl-077909 Oryza glaberrima 36.77 1.00e-154 540.00
IUUC-Ogu-078053 Oryza glumaepatula 36.35 5.00e-152 531.00
IUUC-Oin-079700 Oryza indica 36.77 1.00e-154 540.00
IUUC-Olo-080707 Oryza longistaminata 37.41 5.00e-161 561.00
IUUC-Oni-082754 Oryza nivara 36.70 1.00e-153 536.00
IUUC-Opu-083854 Oryza punctata 36.70 1.00e-153 536.00
IUUC-Oru-085071 Oryza rufipogon 36.47 5.00e-153 535.00
IUUC-Osa-085370 Oryza sativa 36.77 1.00e-154 540.00
IUUC-Ola-086362 Oryzias latipes 78.57 0.00e+00 1357.00
IUUC-Oga-088078 Otolemur garnettii 95.49 0.00e+00 1630.00
IUUC-Oar-089679 Ovis aries 96.25 0.00e+00 1660.00
IUUC-Ptr-091680 Pan troglodytes 95.78 0.00e+00 1652.00
IUUC-Pan-092816 Papio anubis 95.95 0.00e+00 1172.00
IUUC-Psi-093890 Pelodiscus sinensis 90.05 0.00e+00 1572.00
IUUC-Pma-094654 Petromyzon marinus 64.81 0.00e+00 1117.00
IUUC-Pno-095071 Phaeosphaeria nodorum 28.42 1.00e-56 214.00
IUUC-Ppa-095198 Physcomitrella patens 34.93 9.00e-147 514.00
IUUC-Pfo-097465 Poecilia formosa 79.04 0.00e+00 1374.00
IUUC-Pab-098686 Pongo abelii 95.67 0.00e+00 1652.00
IUUC-Pop-100066 Populus trichocarpa 36.24 1.00e-160 560.00
IUUC-Pca-100990 Procavia capensis 85.49 0.00e+00 1425.00
IUUC-Ppe-101500 Prunus persica 37.13 8.00e-163 567.00
IUUC-Pva-102809 Pteropus vampyrus 96.25 0.00e+00 1664.00
IUUC-Pgr-103404 Puccinia graminis 32.34 4.00e-139 488.00
IUUC-Ptt-103952 Puccinia triticina 31.60 1.00e-128 454.00
IUUC-Pte-104216 Pyrenophora teres 27.74 3.00e-55 210.00
IUUC-Rno-105949 Rattus norvegicus 94.97 0.00e+00 1457.00
IUUC-Sce-106462 Saccharomyces cerevisiae 24.66 5.00e-59 222.00
IUUC-Sha-106689 Sarcophilus harrisii 91.66 0.00e+00 1590.00
IUUC-Sja-107696 Schizosaccharomyces japonicus 30.75 7.00e-97 348.00
IUUC-Spo-108173 Schizosaccharomyces pombe 29.37 1.00e-105 377.00
IUUC-Smo-109505 Selaginella moellendorffii 37.46 9.00e-150 524.00
IUUC-Sit-110176 Setaria italica 36.04 2.00e-157 550.00
IUUC-Sly-111671 Solanum lycopersicum 35.44 5.00e-162 564.00
IUUC-Sar-113073 Sorex araneus 81.27 0.00e+00 1256.00
IUUC-Sbi-114139 Sorghum bicolor 36.61 2.00e-151 529.00
IUUC-Sre-115158 Sporisorium reilianum 35.23 2.00e-163 570.00
IUUC-Tgu-117481 Taeniopygia guttata 90.69 0.00e+00 1571.00
IUUC-Tru-118468 Takifugu rubripes 78.61 0.00e+00 1371.00
IUUC-Tni-120478 Tetraodon nigroviridis 78.13 0.00e+00 1363.00
IUUC-Tca-121780 Theobroma cacao 36.47 3.00e-161 562.00
IUUC-Tre-121900 Trichoderma reesei 28.33 3.00e-53 203.00
IUUC-Tvi-122343 Trichoderma virens 27.61 2.00e-52 201.00
IUUC-Tae-123578 Triticum aestivum 36.73 4.00e-151 528.00
IUUC-Tur-126430 Triticum urartu 35.96 1.00e-142 500.00
IUUC-Tme-127007 Tuber melanosporum 29.07 3.00e-60 227.00
IUUC-Tbe-128073 Tupaia belangeri 87.00 0.00e+00 1474.00
IUUC-Ttr-128879 Tursiops truncatus 95.78 0.00e+00 1642.00
IUUC-Uma-129356 Ustilago maydis 34.29 1.00e-163 571.00
IUUC-Vda-129676 Verticillium dahliae 29.31 1.00e-53 205.00
IUUC-Vvi-131744 Vitis vinifera 36.59 3.00e-159 555.00
IUUC-Xtr-132093 Xenopus tropicalis 79.81 0.00e+00 1379.00
IUUC-Xma-133199 Xiphophorus maculatus 79.98 0.00e+00 1374.00
IUUC-Yli-134385 Yarrowia lipolytica 26.63 4.00e-74 273.00
IUUC-Zma-135567 Zea mays 36.59 3.00e-149 522.00
Created Date 25-Jun-2017

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