iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112508

Ensembl Protein ID

PGSC0003DMT400077205

UniProt Accession

M1CY16; M1CY16_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400030026	PGSC0003DMT400077205	PGSC0003DMT400077205

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.40e-31	107.7	277	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p+e++CpIsl+l rdPv+++sG+tydr+sI++w++sg++tcP+ +q+l +  l+Pn++l++liq+wce+n++
   Q: 277  DIPDELRCPISLDLIRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYALKSLIQQWCEDNNI 350
           69********************************************************************9975 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNELIVSSVY PPTGNLLEAL IHISNEVFSM EKLPFVQMKN ISSMVRRIKI LTSLFEEIQE 60
TSSAARLPPS SILCLAELSC VIQKVKLLIE ICKEGSSLWN LMQTELISNQ FHALIKEMDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTTTCCC CTTGGCAGAA TATAGAAAGT TTCTTTAACT AACAACTTAA ATATTACCTA 60
GTCATGAAAT AGCAACGCGT ACAAGCATGA ATGAACTCAT AGTCTCCTCA GTATATCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102584299

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002723	Amborella trichopoda	49.48	2.00e-150	525.00
IUUC-Gma-042912	Glycine max	61.34	0.00e+00	654.00
IUUC-Mtr-058278	Medicago truncatula	65.03	0.00e+00	809.00
IUUC-Olu-087884	Ostreococcus lucimarinus	51.47	4.00e-23	97.80
IUUC-Ppa-095610	Physcomitrella patens	44.72	6.00e-142	496.00
IUUC-Pop-098818	Populus trichocarpa	70.11	0.00e+00	839.00
IUUC-Ppe-101201	Prunus persica	69.56	0.00e+00	874.00
IUUC-Smo-109110	Selaginella moellendorffii	45.19	7.00e-149	519.00
IUUC-Sly-111580	Solanum lycopersicum	93.24	0.00e+00	961.00
IUUC-Tca-121845	Theobroma cacao	70.00	0.00e+00	932.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence