iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__1542__AT3G51930.1	fgenesh2_kg.5__1542__AT3G51930.1	fgenesh2_kg.5__1542__AT3G51930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-23	81.6	173	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla    +++ sGs+D+t+kvW+l++ ++l 
   Q: 173  HADSISCLAV-HaGIIYSGSWDKTLKVWRLSDLKCLE 208
           9********9.559******************99986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVRLIQEGVL MSSSSSSTTS NSNDSDDSLS PSASTKSFVL NTLRPPITGA YKPLAVLSAH 60
VGSVSSLALC GEFLLSASQG KDIIVWQQPD LKIFAKFGQG DGSVKALVSV GSKVFTAHQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCAAAATAG AAACGAAATC TTGAATCTCT TGATGCGATG GTGAGATTAA TCCAAGAAGG 60
AGTCTTGATG TCTTCATCTT CGTCCTCAAC GACAAGCAAC AGCAACGACT CTGACGATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_485550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	64.48	7.00e-120	422.00
IUUC-Ath-006729	Arabidopsis thaliana	95.65	0.00e+00	717.00
IUUC-Bdi-014229	Brachypodium distachyon	55.17	2.00e-95	341.00
IUUC-Bol-015324	Brassica oleracea	85.58	0.00e+00	644.00
IUUC-Bra-017666	Brassica rapa	89.79	0.00e+00	637.00
IUUC-Gma-043773	Glycine max	75.60	4.00e-142	496.00
IUUC-Hvu-047162	Hordeum vulgare	54.36	2.00e-75	275.00
IUUC-Lpe-050845	Leersia perrieri	54.05	5.00e-89	320.00
IUUC-Mtr-058525	Medicago truncatula	69.19	3.00e-140	491.00
IUUC-Mac-064928	Musa acuminata	62.64	5.00e-99	353.00
IUUC-Oba-075989	Oryza barthii	59.50	3.00e-112	397.00
IUUC-Obr-076522	Oryza brachyantha	57.77	2.00e-110	391.00
IUUC-Ogl-077747	Oryza glaberrima	58.42	1.00e-110	392.00
IUUC-Ogu-078306	Oryza glumaepatula	59.17	3.00e-110	391.00
IUUC-Oin-079397	Oryza indica	59.44	8.00e-111	392.00
IUUC-Olo-080627	Oryza longistaminata	55.56	1.00e-74	272.00
IUUC-Ome-081295	Oryza meridionalis	58.89	3.00e-110	391.00
IUUC-Oni-082259	Oryza nivara	58.42	1.00e-110	392.00
IUUC-Opu-083686	Oryza punctata	58.82	2.00e-111	395.00
IUUC-Oru-084598	Oryza rufipogon	59.44	8.00e-111	392.00
IUUC-Osa-085705	Oryza sativa	58.42	1.00e-106	379.00
IUUC-Ppa-095309	Physcomitrella patens	44.66	5.00e-78	284.00
IUUC-Pop-099519	Populus trichocarpa	75.00	5.00e-149	520.00
IUUC-Ppe-101179	Prunus persica	72.70	1.00e-149	522.00
IUUC-Sit-109966	Setaria italica	59.13	9.00e-105	372.00
IUUC-Sly-111222	Solanum lycopersicum	67.89	2.00e-132	464.00
IUUC-Stu-112315	Solanum tuberosum	71.89	8.00e-140	489.00
IUUC-Sbi-114323	Sorghum bicolor	55.53	1.00e-101	362.00
IUUC-Tca-121448	Theobroma cacao	74.79	9.00e-147	512.00
IUUC-Tae-123437	Triticum aestivum	56.23	3.00e-104	371.00
IUUC-Vvi-131470	Vitis vinifera	71.67	4.00e-142	496.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence