iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017666

Ensembl Protein ID

Bra006883.1-P

UniProt Accession

M4CRP2; M4CRP2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006883	Bra006883.1	Bra006883.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-23	82.6	178	213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla    +++ sGs+D+t+kvW+l++ ++l 
   Q: 178  HADSISCLAV-HaGIIYSGSWDKTLKVWRLSDLKCLE 213
           9********9.559******************99986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MVRSIQEGGV LMMSSSSSST TTSNNGTDSD DSLSPSSASS KSFVLTTLPP PITGAYKPLA 60
VLSAHVGSVS SLALCGEFLL SASQGKDIIV WQQPDLKIFT KFGQGDGSVK ALVSVGSKVF 120

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Nucleotide Sequence
(Fasta)

ATGGTGAGAT CAATCCAAGA AGGAGGAGTC TTGATGATGT CTTCATCCTC TTCCTCCACA 60
ACCACAAGCA ACAACGGAAC CGACTCCGAC GATTCTCTCA GCCCCTCCTC CGCCTCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	64.31	2.00e-121	428.00
IUUC-Aly-005620	Arabidopsis lyrata	89.79	0.00e+00	667.00
IUUC-Bol-015680	Brassica oleracea	95.76	0.00e+00	700.00
IUUC-Mtr-058525	Medicago truncatula	69.87	1.00e-144	505.00
IUUC-Mac-064928	Musa acuminata	59.14	1.00e-99	356.00
IUUC-Olo-080627	Oryza longistaminata	67.84	3.00e-74	271.00
IUUC-Ppa-095309	Physcomitrella patens	45.30	8.00e-78	283.00
IUUC-Pop-099167	Populus trichocarpa	75.07	7.00e-151	526.00
IUUC-Sly-111222	Solanum lycopersicum	67.20	5.00e-132	463.00
IUUC-Stu-112315	Solanum tuberosum	69.68	6.00e-139	486.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence