iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095926

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545008

Gene Name

PHYPADRAFT_135371

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S119_113V6	PP1S119_113V6.1	PP1S119_113V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-38	130.1	477	513
E3 activity/RING/RING	2.30e-07	32.0	5	47
UBD/Beta-Prp	3.20e-73	247.3	305	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v +++  ++ t+l++GsdD+t++vWDlr g++
   Q: 477  GHLEDVIGVDIdDSgTYLATGSDDKTCRVWDLRMGHP 513
           79999******8446*****************99876 PP

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e+     k+  ++++CgHvf++dC   w       ++e +CP+Cr
   Q: 5    CKICFESAsgqgKQ-ARITSCGHVFCHDCATIW------FRTETNCPVCR 47
           99****99888544.9*****************......**********8 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           +++h ++++ +++ p+++l+at+s+d+  +v+dv+ ++ ++ lsgh  + +avkfsp +  +  t+s+D+t ++w+ +tg+c+++l+gh+d+v 
   Q: 305  FTKHMGPVHGIAVNPSGNLVATASWDHLCRVYDVHLEDEVAVLSGHMLGLYAVKFSPAKRdLVGTVSSDQTCRLWNTDTGECLRVLEGHTDEVN 398
           567888999************************************************98757789***************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsn 191
            lsf p ++ l+++s+d t ++wd e+g  +  tl+gh++ v +v+++p g  l++++s D t +lWd ++g+ ++tl+g h ++v  +++d++
   Q: 399  GLSFKPGTHLLATASDDATSMIWDAEKGIPIT-TLNGHRHGVYGVCFQPGGgHLVATASFDFTAKLWDPRSGEDVQTLRG-HLEDVIGVDIDDS 490
           ******99***********************9.**********************************************9.************* PP
   S: 192  gkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
           g++l++gs+d+t ++wdl+ g+ ++ l++h+  vk+v fsp
   Q: 491  GTYLATGSDDKTCRVWDLRMGHPIVVLKAHSGEVKRVVFSP 531
           *************************************9985 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSLTCKICFE SASGQGKQAR ITSCGHVFCH DCATIWFRTE TNCPVCRNPV AGFSRLIALF 60
DHDAGLQSPS LGFDDEICEN RGEIVGTSGC EDGQVRDSPN GAKSSGVGTS GSGESGAIQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTCTCA CTTGTAAAAT ATGCTTCGAA AGCGCCTCTG GACAAGGCAA GCAAGCTAGA 60
ATTACATCCT GCGGCCATGT GTTCTGTCAC GATTGTGCAA CTATCTGGTT TCGTACGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_135371

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005354	Anolis carolinensis	33.44	2.00e-50	192.00
IUUC-Ame-010648	Astyanax mexicanus	33.55	2.00e-46	179.00
IUUC-Cin-025447	Ciona intestinalis	34.81	3.00e-52	198.00
IUUC-Csv-026024	Ciona savignyi	33.23	2.00e-51	195.00
IUUC-Dre-028787	Danio rerio	36.42	2.00e-54	205.00
IUUC-Dno-029788	Dasypus novemcinctus	30.45	6.00e-42	164.00
IUUC-Eeu-034898	Erinaceus europaeus	37.45	3.00e-43	168.00
IUUC-Gmo-039010	Gadus morhua	35.59	9.00e-48	183.00
IUUC-Gac-042552	Gasterosteus aculeatus	36.90	2.00e-53	202.00
IUUC-Lch-049902	Latimeria chalumnae	34.53	5.00e-53	201.00
IUUC-Mdo-062166	Monodelphis domestica	33.77	5.00e-53	201.00
IUUC-Mmu-063653	Mus musculus	33.44	1.00e-51	196.00
IUUC-Mlu-067792	Myotis lucifugus	34.30	6.00e-52	197.00
IUUC-Ont-072191	Oreochromis niloticus	39.22	1.00e-55	209.00
IUUC-Psi-093232	Pelodiscus sinensis	32.14	9.00e-50	190.00
IUUC-Pfo-096971	Poecilia formosa	37.81	6.00e-55	207.00
IUUC-Rno-105944	Rattus norvegicus	34.63	1.00e-50	193.00
IUUC-Vpa-130692	Vicugna pacos	33.98	5.00e-47	181.00
IUUC-Xtr-132612	Xenopus tropicalis	34.02	5.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence