iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108882

Ensembl Protein ID

EFJ35022

UniProt Accession

D8QXB7; D8QXB7_SELML

Genbank Protein ID

EFJ35022.1

Protein Name

WD repeat domain-containing protein

Genbank Nucleotide ID

GL377568

Gene Name

FAP4-1; SELMODRAFT_449747

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_449747	EFJ35022	EFJ35022

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-13	51.0	394	429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           Htds+t+l+     +++v++s D +++vW++ +  +
   Q: 394  HTDSITGLDVciRKPIIVTCSMDRSVRVWNYQDRQC 429
           *******98778558***************877655 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MANQLIPTHV FGLNGTQKGC LYFLDDATFL YPAGHNVVIQ TVDQKQQKII AGTPDTYGIT 60
ALALSPSKKI VAIAERAPPF MLGSERRASS ASSESRSSVI PTDARSMEGA ESEGRTISPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAAACC AGCTAATTCC CACGCATGTC TTTGGCTTGA ACGGGACACA GAAAGGGTGC 60
TTGTATTTTC TTGATGATGC TACATTTTTA TATCCAGCTG GTCACAATGT GGTTATTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023218--UPF0291_struct_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_449747

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001714	Ailuropoda melanoleuca	35.06	2.00e-121	428.00
IUUC-Apl-003618	Anas platyrhynchos	41.00	1.00e-151	529.00
IUUC-Aca-004758	Anolis carolinensis	37.70	0.00e+00	702.00
IUUC-Ame-011060	Astyanax mexicanus	33.77	4.00e-170	591.00
IUUC-Bta-012707	Bos taurus	36.32	0.00e+00	642.00
IUUC-Cja-019396	Callithrix jacchus	34.44	2.00e-113	402.00
IUUC-Cfa-020454	Canis familiaris	38.26	0.00e+00	784.00
IUUC-Cpo-022058	Cavia porcellus	37.60	0.00e+00	735.00
IUUC-Cre-022624	Chlamydomonas reinhardtii	40.09	0.00e+00	642.00
IUUC-Csa-023207	Chlorocebus sabaeus	37.90	0.00e+00	741.00
IUUC-Cho-025027	Choloepus hoffmanni	37.16	4.00e-107	381.00
IUUC-Cin-025464	Ciona intestinalis	49.54	1.00e-59	221.00
IUUC-Csv-025972	Ciona savignyi	37.24	0.00e+00	726.00
IUUC-Dre-027808	Danio rerio	34.93	7.00e-163	567.00
IUUC-Dno-028916	Dasypus novemcinctus	37.52	0.00e+00	741.00
IUUC-Dor-031063	Dipodomys ordii	36.35	2.00e-88	319.00
IUUC-Dme-031680	Drosophila melanogaster	25.73	5.00e-88	318.00
IUUC-Ete-032391	Echinops telfairi	35.86	9.00e-106	377.00
IUUC-Eca-034029	Equus caballus	37.42	0.00e+00	746.00
IUUC-Fca-035408	Felis catus	37.91	0.00e+00	757.00
IUUC-Fal-036882	Ficedula albicollis	36.27	4.00e-162	564.00
IUUC-Gmo-038581	Gadus morhua	39.37	1.00e-97	350.00
IUUC-Gga-041149	Gallus gallus	42.16	2.00e-153	535.00
IUUC-Gac-042464	Gasterosteus aculeatus	31.35	5.00e-160	557.00
IUUC-Ggo-045545	Gorilla gorilla	34.53	8.00e-116	410.00
IUUC-Hsa-045981	Homo sapiens	36.77	0.00e+00	723.00
IUUC-Itr-048616	Ictidomys tridecemlineatus	35.59	1.00e-72	266.00
IUUC-Lch-050585	Latimeria chalumnae	23.84	2.00e-11	64.30
IUUC-Loc-052681	Lepisosteus oculatus	38.82	0.00e+00	793.00
IUUC-Laf-054188	Loxodonta africana	37.80	0.00e+00	747.00
IUUC-Mcc-055587	Macaca mulatta	37.09	0.00e+00	731.00
IUUC-Meu-056711	Macropus eugenii	57.46	4.00e-46	178.00
IUUC-Mga-059502	Meleagris gallopavo	37.83	1.00e-179	622.00
IUUC-Mmr-061637	Microcebus murinus	36.36	0.00e+00	737.00
IUUC-Mdo-062272	Monodelphis domestica	37.50	0.00e+00	727.00
IUUC-Mmu-063404	Mus musculus	38.14	0.00e+00	760.00
IUUC-Mpu-066252	Mustela putorius furo	38.46	0.00e+00	763.00
IUUC-Mlu-067652	Myotis lucifugus	35.22	4.00e-178	618.00
IUUC-Nle-069957	Nomascus leucogenys	35.13	2.00e-179	622.00
IUUC-Opr-070883	Ochotona princeps	27.68	2.00e-43	170.00
IUUC-Ont-072023	Oreochromis niloticus	33.25	0.00e+00	660.00
IUUC-Oan-073546	Ornithorhynchus anatinus	33.08	3.00e-72	265.00
IUUC-Ocu-073898	Oryctolagus cuniculus	38.10	0.00e+00	740.00
IUUC-Ola-087473	Oryzias latipes	36.70	2.00e-102	365.00
IUUC-Olu-087727	Ostreococcus lucimarinus	28.07	3.00e-137	482.00
IUUC-Oga-088710	Otolemur garnettii	37.63	0.00e+00	749.00
IUUC-Oar-089552	Ovis aries	37.30	0.00e+00	747.00
IUUC-Ptr-090948	Pan troglodytes	35.01	9.00e-107	379.00
IUUC-Pan-091922	Papio anubis	42.17	0.00e+00	639.00
IUUC-Psi-093500	Pelodiscus sinensis	43.07	0.00e+00	646.00
IUUC-Ppa-095165	Physcomitrella patens	30.17	2.00e-142	499.00
IUUC-Pfo-096491	Poecilia formosa	33.07	3.00e-115	408.00
IUUC-Pab-098021	Pongo abelii	34.69	1.00e-105	376.00
IUUC-Pca-101136	Procavia capensis	44.44	2.00e-16	80.50
IUUC-Pva-102642	Pteropus vampyrus	34.00	1.00e-112	400.00
IUUC-Rno-105412	Rattus norvegicus	24.13	6.00e-13	68.90
IUUC-Sha-106766	Sarcophilus harrisii	36.25	0.00e+00	682.00
IUUC-Sar-113748	Sorex araneus	22.81	2.00e-11	63.90
IUUC-Ssc-116324	Sus scrofa	36.83	0.00e+00	733.00
IUUC-Tgu-117260	Taeniopygia guttata	37.68	1.00e-142	499.00
IUUC-Tru-118464	Takifugu rubripes	33.87	1.00e-104	372.00
IUUC-Tsy-119582	Tarsius syrichta	29.91	4.00e-50	191.00
IUUC-Tni-120901	Tetraodon nigroviridis	33.87	5.00e-103	367.00
IUUC-Tbe-127270	Tupaia belangeri	34.33	2.00e-91	329.00
IUUC-Ttr-128746	Tursiops truncatus	23.84	8.00e-13	68.60
IUUC-Vpa-130565	Vicugna pacos	27.39	4.00e-48	185.00
IUUC-Xtr-131976	Xenopus tropicalis	37.04	0.00e+00	736.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence