iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095393

Ensembl Protein ID

PP1S163_25V6.1

UniProt Accession

A9RG98; A9RG98_PHYPA

Genbank Protein ID

EDQ82081.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DS544896

Gene Name

PHYPADRAFT_158888

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S163_25V6	PP1S163_25V6.1	PP1S163_25V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-17	62.5	276	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gH+++v +++    s++++vs+++D t+k WD+ tg
   Q: 276  GHSEKVVSVDVsktSNRRVVSAAYDRTMKTWDMQTG 311
           8**********9965599**************9886 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEMEDRMGHA IVQACKAMKR RYKLEEGAYV LAVDVISHAE NSQATLELEE KVKSLQFELN 60
QNYQKHSQVS EKVVEVVLES QSLRLQLRDK ETAIRQVHEE LRAAKENPLL VELIANEMHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATGG AGGATCGGAT GGGACATGCA ATTGTGCAAG CCTGTAAGGC AATGAAGCGA 60
CGCTACAAAT TGGAGGAGGG AGCTTATGTG CTAGCTGTTG ATGTCATATC TCATGCAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0000045--P:autophagosome assembly

KEGG

ppp:PHYPADRAFT_158888

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence