iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016620

Ensembl Protein ID

Bra006794.1-P

UniProt Accession

M4CRF3; M4CRF3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006794	Bra006794.1	Bra006794.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	7.30e-07	30.0	13	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 14   tlkvnpsdtVaeLKekiekklgippeqqrLiyk..GkiLeddktLadyglkdgstihllekksg 75
            ++++p++tV+++K+++ ++   p+  qrLi+    ++Led k+La+ ++ ++ ++ l+++k +
   Q: 13   FIQCDPTETVLDVKQRLCTLIEQPVSNQRLILMstEEVLEDSKSLAEQKVENDAVVALTLRKDD 76
           45678***************9999999****55457789*****************99999865 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MYIRVKRMKA TYFIQCDPTE TVLDVKQRLC TLIEQPVSNQ RLILMSTEEV LEDSKSLAEQ 60
KVENDAVVAL TLRKDDGDFE DVDIAQPTDF SVA 93

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATATCC GTGTGAAGCG CATGAAAGCC ACTTACTTTA TCCAATGCGA TCCCACAGAG 60
ACTGTTTTGG ATGTTAAACA AAGACTCTGT ACCCTCATTG AGCAACCAGT CAGCAACCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002796	Amborella trichopoda	63.33	5.00e-32	128.00
IUUC-Aly-005974	Arabidopsis lyrata	86.02	4.00e-44	168.00
IUUC-Ath-007691	Arabidopsis thaliana	86.02	7.00e-44	167.00
IUUC-Bdi-014917	Brachypodium distachyon	64.21	1.00e-32	130.00
IUUC-Bol-015146	Brassica oleracea	95.70	4.00e-47	178.00
IUUC-Cre-022721	Chlamydomonas reinhardtii	50.59	2.00e-19	86.30
IUUC-Dme-031644	Drosophila melanogaster	28.57	6.00e-04	35.80
IUUC-Gmo-039651	Gadus morhua	27.59	2.00e-03	33.50
IUUC-Gma-043862	Glycine max	67.74	3.00e-33	132.00
IUUC-Lpe-051645	Leersia perrieri	69.23	3.00e-33	132.00
IUUC-Mcc-055397	Macaca mulatta	28.92	3.00e-05	40.00
IUUC-Mtr-058736	Medicago truncatula	58.89	1.00e-28	117.00
IUUC-Obr-076724	Oryza brachyantha	72.53	2.00e-34	136.00
IUUC-Oin-080167	Oryza indica	71.43	2.00e-33	132.00
IUUC-Opu-084014	Oryza punctata	72.53	4.00e-34	135.00
IUUC-Osa-085650	Oryza sativa	71.43	2.00e-33	132.00
IUUC-Ppa-095566	Physcomitrella patens	56.52	2.00e-26	109.00
IUUC-Pop-099504	Populus trichocarpa	76.67	4.00e-36	142.00
IUUC-Ppe-101148	Prunus persica	76.67	9.00e-36	140.00
IUUC-Smo-109472	Selaginella moellendorffii	63.01	2.00e-23	99.80
IUUC-Sly-111382	Solanum lycopersicum	70.79	1.00e-33	133.00
IUUC-Sbi-114447	Sorghum bicolor	66.67	7.00e-32	127.00
IUUC-Tca-121839	Theobroma cacao	77.78	4.00e-38	149.00
IUUC-Tae-125514	Triticum aestivum	66.67	2.00e-32	129.00
IUUC-Vvi-130839	Vitis vinifera	74.16	3.00e-36	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence