iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071569

Ensembl Protein ID

ENSONIP00000013440.1

UniProt Accession

I3JX45; I3JX45_ORENI

Genbank Protein ID

ENSONIP00000013440

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01001380

Gene Name

tbl1xr1b; LOC100706341

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000010689.1	ENSONIT00000013450.1	ENSONIP00000013440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-53	176.1	439	477
UBD/Beta-Prp	1.20e-64	218.8	160	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++v+++af +d ++l+sGs D+ +++W++ tg l++s
   Q: 439  HQEPVYSVAFsPDgRHLASGSFDKCVHIWNTQTGALVHS 477
           99*********999*******************998875 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.............tlsghdgvvncvvvhpdgnllvsGslDrtvr 162
            ++l+ghe++v  ++++p +d l+sGs d+t+r+w+l++++   +              + + ++ v+++ ++++g ll++Gs+D++ r
   Q: 160  AMVLRGHESEVFICAWNPVNDLLASGSGDSTARIWNLSENSTGGStqlvlrhcireggQDVPSNKDVTSLDWNSEGTLLATGSYDGFAR 248
           5899***********************************999888899**********89999999*********************** PP
   S: 163  lWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsi 246
           +W  k g+l  tl + h++++  l+++++g++++s++ d+t ++wd +tge  +++  h+++ ++v+    ++ ++s+s D  i
   Q: 249  IW-TKDGNLASTLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-SNNTFASCSTDMCI 329
           **.88********76.***************************************************88.77778888888776 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MSISSDEVNF LVYRYLQESG FSHSAFTFGI ESHISQSNIN GALVPPAALI SIIQKGLQYV 60
EAEVSINEDG TLFDGRPIES LSLIDAVMPD VVQTRQQAYR DKLAQQQAAA GSGSSTGPQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCATAA GCAGTGATGA GGTTAATTTC CTGGTTTACA GATATCTGCA GGAGTCGGGT 60
ATGTCCAACA AATCAATATT TGATCAAACA GCTCTCCTTG TGGTTGTAGT AATCGCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	60.71	7.00e-55	206.00
IUUC-Atr-002514	Amborella trichopoda	65.93	2.00e-145	509.00
IUUC-Aly-005622	Arabidopsis lyrata	59.50	2.00e-121	429.00
IUUC-Ath-007137	Arabidopsis thaliana	60.61	5.00e-123	434.00
IUUC-Ago-007869	Ashbya gossypii	25.88	8.00e-39	154.00
IUUC-Ame-011601	Astyanax mexicanus	93.55	0.00e+00	922.00
IUUC-Bdi-014315	Brachypodium distachyon	50.00	2.00e-152	532.00
IUUC-Bol-016277	Brassica oleracea	60.28	3.00e-127	449.00
IUUC-Bra-016944	Brassica rapa	60.56	1.00e-126	447.00
IUUC-Cpo-022080	Cavia porcellus	89.67	0.00e+00	901.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	61.31	4.00e-131	461.00
IUUC-Csv-026257	Ciona savignyi	70.79	0.00e+00	774.00
IUUC-Cne-026946	Cryptococcus neoformans	38.01	4.00e-31	130.00
IUUC-Dre-027906	Danio rerio	93.16	0.00e+00	926.00
IUUC-Gmo-038870	Gadus morhua	94.73	0.00e+00	962.00
IUUC-Gac-041770	Gasterosteus aculeatus	97.07	0.00e+00	1022.00
IUUC-Gma-044208	Glycine max	48.60	7.00e-154	537.00
IUUC-Kpa-049338	Komagataella pastoris	29.30	4.00e-32	132.00
IUUC-Lpe-051084	Leersia perrieri	63.46	5.00e-138	484.00
IUUC-Mtr-058624	Medicago truncatula	47.67	2.00e-144	506.00
IUUC-Mac-065508	Musa acuminata	47.75	6.00e-113	400.00
IUUC-Oba-075618	Oryza barthii	49.19	2.00e-146	512.00
IUUC-Obr-076718	Oryza brachyantha	61.44	1.00e-138	486.00
IUUC-Ogl-077302	Oryza glaberrima	51.35	2.00e-158	552.00
IUUC-Ogu-078718	Oryza glumaepatula	51.35	2.00e-158	552.00
IUUC-Oin-079515	Oryza indica	44.80	3.00e-96	346.00
IUUC-Olo-080427	Oryza longistaminata	64.18	1.00e-133	470.00
IUUC-Ome-081696	Oryza meridionalis	50.27	6.00e-153	534.00
IUUC-Oni-082137	Oryza nivara	51.35	2.00e-158	552.00
IUUC-Opu-083505	Oryza punctata	48.83	2.00e-146	512.00
IUUC-Oru-085276	Oryza rufipogon	51.17	6.00e-158	550.00
IUUC-Osa-085791	Oryza sativa	51.35	2.00e-158	552.00
IUUC-Pma-094105	Petromyzon marinus	64.17	3.00e-102	364.00
IUUC-Ppa-095868	Physcomitrella patens	66.85	8.00e-141	494.00
IUUC-Pop-098989	Populus trichocarpa	62.36	2.00e-129	456.00
IUUC-Smo-109301	Selaginella moellendorffii	63.93	7.00e-143	500.00
IUUC-Sit-110710	Setaria italica	64.54	7.00e-144	504.00
IUUC-Sly-111042	Solanum lycopersicum	51.66	2.00e-154	539.00
IUUC-Stu-112744	Solanum tuberosum	51.27	3.00e-146	511.00
IUUC-Sbi-114420	Sorghum bicolor	64.01	6.00e-144	504.00
IUUC-Tru-118254	Takifugu rubripes	94.65	0.00e+00	976.00
IUUC-Tni-120861	Tetraodon nigroviridis	94.93	0.00e+00	974.00
IUUC-Tca-121739	Theobroma cacao	57.42	6.00e-126	444.00
IUUC-Vvi-131193	Vitis vinifera	60.16	5.00e-129	454.00
IUUC-Xma-134168	Xiphophorus maculatus	96.10	0.00e+00	995.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence