iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015767

Ensembl Protein ID

Bo3g081600.1

UniProt Accession

A0A0D3BCV8; A0A0D3BCV8_BRAOL

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g081600	Bo3g081600.1	Bo3g081600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.60e-16	59.8	120	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskks 75
            vkvs++g+++++++dl  + +++dL +a+++ +                         l+ se+ + YeD+dGD++ l++D++++++v+      s
   Q: 120  LVKVSMDGAPYLRKVDLTMYKSYQDLSDALAKmFSsftmgnygaqgmidfmnesklmnLLNSSEYVPSYEDKDGDWM-LVGDVPWEMFVQ------S 209
           69******************************622566999**************9977788***************.************......* PP
   S: 76   llrlliqk 83
           ++rl+i+k
   Q: 210  CKRLRIMK 217
           *******8 PP

Organism

Brassica oleracea

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MIGQLMNLNA TELCLGLPGG TKAVESPAKS SVRNKRGFSE TMDLMLNLQC NKEETVDLNN 60
ATASEEKTLL KDPAKPPAKA QVVGWPPVRN YRKNMMTQQK TSGEEEASSE KAGNGGGAAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGGAC AGCTTATGAA CCTTAACGCG ACGGAGCTCT GTCTCGGCCT CCCTGGCGGG 60
ACTAAAGCCG TCGAGAGCCC GGCCAAATCG TCGGTGAGGA ACAAGAGAGG CTTCTCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005642	Arabidopsis lyrata	87.14	3.00e-110	390.00
IUUC-Ath-006734	Arabidopsis thaliana	83.54	3.00e-113	400.00
IUUC-Bra-017555	Brassica rapa	99.58	1.00e-127	448.00
IUUC-Gma-043505	Glycine max	76.89	2.00e-99	354.00
IUUC-Lpe-050724	Leersia perrieri	46.32	4.00e-42	164.00
IUUC-Mtr-058575	Medicago truncatula	72.29	1.00e-86	312.00
IUUC-Oba-075945	Oryza barthii	71.26	4.00e-62	231.00
IUUC-Oin-079136	Oryza indica	71.84	6.00e-62	230.00
IUUC-Ome-081785	Oryza meridionalis	59.04	6.00e-45	173.00
IUUC-Oni-082674	Oryza nivara	71.26	4.00e-62	231.00
IUUC-Osa-086164	Oryza sativa	71.84	6.00e-62	230.00
IUUC-Ppa-095740	Physcomitrella patens	43.98	1.00e-32	134.00
IUUC-Pop-099950	Populus trichocarpa	72.54	2.00e-93	334.00
IUUC-Ppe-101719	Prunus persica	70.64	2.00e-83	301.00
IUUC-Sly-111331	Solanum lycopersicum	70.28	6.00e-82	296.00
IUUC-Stu-112437	Solanum tuberosum	65.04	4.00e-82	297.00
IUUC-Tca-121826	Theobroma cacao	73.58	3.00e-94	337.00
IUUC-Tae-124253	Triticum aestivum	72.94	4.00e-64	237.00
IUUC-Vvi-131523	Vitis vinifera	77.78	9.00e-84	302.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence