iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076428

Ensembl Protein ID

OB03G40780.1

UniProt Accession

J3LSQ2; J3LSQ2_ORYBR

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G40780	OB03G40780.1	OB03G40780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.80e-17	62.3	124	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt....lt.......elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           +vkvs++g+++++++dl+ + +++dL  a+++    +t       e+++s+   +YeD+dGD++ l++D++++++v+      s++rl+i+k
   Q: 124  FVKVSMDGAPYLRKVDLKMYNSYKDLSIALQKmfgtFTttgnnmnEVNGSDAVTTYEDKDGDWM-LVGDVPWQMFVE------SCKRLRIMK 208
           8*******************************8765226788888*******************.************......********8 PP

Organism

Oryza brachyantha

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAGADVGTEL RLGLPGGGAG EAAAAAKAGK RGFEETIDLK LKLPTAGMEE AAEAPAAEKA 60
KRPAEAAAAD AEKPPAPKAQ AVGWPPVRSY RRNIMTVQSV KTKKEEEADK QQPAANASGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGGCG CCGACGTCGG GACGGAGCTC CGGCTGGGGC TGCCCGGAGG CGGCGCCGGC 60
GAGGCCGCGG CGGCGGCCAA GGCCGGGAAG AGGGGCTTCG AGGAGACCAT TGACCTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

obr:102713175

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	84.87	9.00e-65	238.00
IUUC-Bdi-014647	Brachypodium distachyon	77.27	1.00e-66	245.00
IUUC-Hvu-047332	Hordeum vulgare	80.79	7.00e-67	245.00
IUUC-Ogl-077356	Oryza glaberrima	78.81	9.00e-72	261.00
IUUC-Ogu-078777	Oryza glumaepatula	77.97	1.00e-76	278.00
IUUC-Oin-079778	Oryza indica	78.81	9.00e-72	261.00
IUUC-Ome-081785	Oryza meridionalis	72.94	9.00e-68	248.00
IUUC-Oni-082706	Oryza nivara	78.39	3.00e-71	259.00
IUUC-Opu-083338	Oryza punctata	80.00	2.00e-72	264.00
IUUC-Oru-084731	Oryza rufipogon	78.81	9.00e-72	261.00
IUUC-Osa-085413	Oryza sativa	78.81	9.00e-72	261.00
IUUC-Ppa-095740	Physcomitrella patens	40.49	7.00e-27	114.00
IUUC-Sit-109721	Setaria italica	75.49	3.00e-63	233.00
IUUC-Sbi-114407	Sorghum bicolor	73.17	2.00e-61	227.00
IUUC-Tae-124410	Triticum aestivum	81.19	2.00e-67	247.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence