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Tag Content
UUCD2 ID IUUC-Ppa-095208
UUCD1 version UUC-PhP-00396
Ensembl Protein ID PP1S196_2V6.1
UniProt Accession A9TAU4; A9TAU4_PHYPA
Genbank Protein ID EDQ59439.1
Protein Name Predicted protein
Genbank Nucleotide ID DS545085
Gene Name PHYPADRAFT_193196
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S196_2V6 PP1S196_2V6.1 PP1S196_2V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.60e-49 162.5 145 183
UBD/Beta-Prp 6.80e-92 308.6 23 220
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f   ++ lvsG+ D  ++vWDl+t+ +++
   Q: 145  GHRDQVTDLVFleRSKKLVSGCKDTHVRVWDLDTQSCVQ 183
           8**********995599*******************987 PP
   

   UBD/Beta-Prp
   S: 57   avkfspdgkilvtgseDrtikvwdlstgkcvhtlk...ghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpd 148
            v+f+++gk+l+ g+  +++ vw++++g cv  l    g    v++++  ps+ + +++G +d tirvwd+ +g+c   +l+gh+g+v+ ++++++
   Q: 23   RVCFDNSGKLLLAGALEQFL-VWNVKQGRCVNLLVpsaGARPLVTAIATAPSSaSLVAVGYKDGTIRVWDIVKGTCEM-VLTGHKGAVTALAYNKT 116
           58999999999999999887.999999999999987778888899999999665888899999999999999999999.99999999999999999 PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           g+ll+sGs+D+ + +Wd   ++ l++l+g h d+v+ l f + +k lvsg +d+ v++wdl t++cv++   h++ v+ ++++p + ++v+gs+D 
   Q: 117  GSLLASGSTDTDIIVWDAVAETGLYRLKG-HRDQVTDLVFLERSKKLVSGCKDTHVRVWDLDTQSCVQRIVSHRSAVWALDVDPSERFVVTGSADA 211
           99999999999999999999999999998.999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 245  siriWdlrs 253
            ir++ + +
   Q: 212  EIRVFGVVN 220
           999985544 PP
   
Organism Physcomitrella patens
Protein Sequence
(Fasta)
MVKAYLRYEE GAAFGLVASG EARVCFDNSG KLLLAGALEQ FLVWNVKQGR CVNLLVPSAG 60
ARPLVTAIAT APSSASLVAV GYKDGTIRVW DIVKGTCEMV LTGHKGAVTA LAYNKTGSLL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ppa-095208|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGTTTTGCTG CGTTATTGCA GCCATGGCGA GTCTGGTTTA GGGTTTCAGG CCCTCCACGT 60
TCCCCAGCCC CGCACCGTGA GTCCTGCACC CAGCCATGGT GAAGGCGTAT CTCCGCTACG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ppa-095208|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG ppp:PHYPADRAFT_193196
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000784 Aegilops tauschii 48.06 0.00e+00 753.00
IUUC-Aml-001245 Ailuropoda melanoleuca 39.79 2.00e-180 625.00
IUUC-Atr-002700 Amborella trichopoda 52.08 0.00e+00 943.00
IUUC-Apl-004164 Anas platyrhynchos 42.53 4.00e-150 524.00
IUUC-Aca-004765 Anolis carolinensis 40.23 0.00e+00 631.00
IUUC-Aly-006503 Arabidopsis lyrata 50.64 0.00e+00 893.00
IUUC-Ath-006848 Arabidopsis thaliana 51.76 0.00e+00 890.00
IUUC-Ago-007909 Ashbya gossypii 34.85 1.00e-151 530.00
IUUC-Acl-008238 Aspergillus clavatus 37.75 4.00e-167 581.00
IUUC-Afl-008544 Aspergillus flavus 36.09 3.00e-155 542.00
IUUC-Afu-008868 Aspergillus fumigatus 36.16 2.00e-159 555.00
IUUC-Ani-009367 Aspergillus nidulans 36.17 2.00e-158 552.00
IUUC-Ang-009732 Aspergillus niger 37.27 4.00e-167 581.00
IUUC-Aor-010140 Aspergillus oryzae 36.43 7.00e-158 550.00
IUUC-Ate-010572 Aspergillus terreus 36.44 8.00e-157 547.00
IUUC-Ame-010956 Astyanax mexicanus 45.74 2.00e-132 466.00
IUUC-Bgr-012296 Blumeria graminis 33.61 3.00e-157 548.00
IUUC-Bta-012716 Bos taurus 39.10 0.00e+00 650.00
IUUC-Bci-013699 Botrytis cinerea 34.96 2.00e-155 542.00
IUUC-Bdi-014525 Brachypodium distachyon 48.61 0.00e+00 840.00
IUUC-Bol-015117 Brassica oleracea 50.21 0.00e+00 889.00
IUUC-Bra-016869 Brassica rapa 50.11 0.00e+00 889.00
IUUC-Cel-018570 Caenorhabditis elegans 30.59 1.00e-97 350.00
IUUC-Cja-019425 Callithrix jacchus 39.34 0.00e+00 628.00
IUUC-Cfa-020787 Canis familiaris 40.13 0.00e+00 638.00
IUUC-Cpo-021729 Cavia porcellus 41.57 7.00e-139 486.00
IUUC-Cre-022678 Chlamydomonas reinhardtii 50.19 9.00e-123 434.00
IUUC-Csa-024098 Chlorocebus sabaeus 39.70 0.00e+00 641.00
IUUC-Cho-024495 Choloepus hoffmanni 41.43 8.00e-103 367.00
IUUC-Cin-025245 Ciona intestinalis 35.42 2.00e-106 378.00
IUUC-Cgl-026708 Colletotrichum gloeosporioides 36.94 3.00e-158 551.00
IUUC-Cne-026835 Cryptococcus neoformans 40.55 1.00e-112 400.00
IUUC-Cme-027162 Cyanidioschyzon merolae 27.81 3.00e-35 143.00
IUUC-Dre-027874 Danio rerio 40.38 0.00e+00 647.00
IUUC-Dno-028905 Dasypus novemcinctus 40.23 0.00e+00 650.00
IUUC-Dor-030383 Dipodomys ordii 33.27 4.00e-71 262.00
IUUC-Dse-031297 Dothistroma septosporum 36.33 2.00e-156 545.00
IUUC-Dme-031956 Drosophila melanogaster 34.32 1.00e-143 503.00
IUUC-Ete-032608 Echinops telfairi 38.15 2.00e-104 372.00
IUUC-Eca-034181 Equus caballus 40.02 0.00e+00 642.00
IUUC-Eeu-034495 Erinaceus europaeus 39.96 6.00e-176 610.00
IUUC-Fca-035994 Felis catus 40.92 2.00e-176 612.00
IUUC-Fal-036611 Ficedula albicollis 44.35 8.00e-133 467.00
IUUC-Fox-037807 Fusarium oxysporum 37.04 1.00e-159 556.00
IUUC-Fso-038090 Fusarium solani 36.51 2.00e-157 549.00
IUUC-Gmo-039018 Gadus morhua 33.75 1.00e-86 313.00
IUUC-Ggr-039748 Gaeumannomyces graminis 36.40 2.00e-160 558.00
IUUC-Gga-040707 Gallus gallus 44.75 4.00e-134 471.00
IUUC-Gac-042334 Gasterosteus aculeatus 35.41 7.00e-47 181.00
IUUC-Gma-043860 Glycine max 52.14 0.00e+00 893.00
IUUC-Ggo-045334 Gorilla gorilla 39.55 0.00e+00 632.00
IUUC-Hsa-046996 Homo sapiens 39.59 0.00e+00 634.00
IUUC-Hvu-047381 Hordeum vulgare 46.28 2.00e-134 471.00
IUUC-Itr-047938 Ictidomys tridecemlineatus 39.38 0.00e+00 629.00
IUUC-Kpa-049185 Komagataella pastoris 32.90 8.00e-145 507.00
IUUC-Lch-050098 Latimeria chalumnae 39.06 8.00e-155 540.00
IUUC-Lpe-050710 Leersia perrieri 51.43 0.00e+00 845.00
IUUC-Loc-052745 Lepisosteus oculatus 37.35 9.00e-167 580.00
IUUC-Lma-053104 Leptosphaeria maculans 35.51 4.00e-156 545.00
IUUC-Laf-054395 Loxodonta africana 39.59 0.00e+00 634.00
IUUC-Mcc-055077 Macaca mulatta 39.91 0.00e+00 637.00
IUUC-Meu-056418 Macropus eugenii 44.39 5.00e-102 365.00
IUUC-Mor-057031 Magnaporthe oryzae 36.29 1.00e-146 513.00
IUUC-Mpo-057420 Magnaporthe poae 37.04 8.00e-160 556.00
IUUC-Mtr-057838 Medicago truncatula 50.98 0.00e+00 921.00
IUUC-Mla-058854 Melampsora laricipopulina 34.35 3.00e-146 512.00
IUUC-Mga-060120 Meleagris gallopavo 42.58 1.00e-136 479.00
IUUC-Mvi-060407 Microbotryum violaceum 37.06 7.00e-177 613.00
IUUC-Mmr-060635 Microcebus murinus 39.26 2.00e-180 625.00
IUUC-Mdo-063023 Monodelphis domestica 39.21 0.00e+00 644.00
IUUC-Mmu-064103 Mus musculus 39.13 0.00e+00 637.00
IUUC-Mac-065569 Musa acuminata 51.65 0.00e+00 901.00
IUUC-Mpu-066462 Mustela putorius furo 39.91 0.00e+00 640.00
IUUC-Mlu-067894 Myotis lucifugus 39.70 0.00e+00 636.00
IUUC-Nfi-068321 Neosartorya fischeri 36.95 6.00e-163 567.00
IUUC-Ncr-068661 Neurospora crassa 41.70 2.00e-115 409.00
IUUC-Nle-069409 Nomascus leucogenys 39.59 0.00e+00 638.00
IUUC-Opr-070445 Ochotona princeps 42.14 6.00e-123 434.00
IUUC-Ont-072339 Oreochromis niloticus 39.42 9.00e-172 596.00
IUUC-Oan-073688 Ornithorhynchus anatinus 39.77 3.00e-171 595.00
IUUC-Ocu-074227 Oryctolagus cuniculus 39.70 0.00e+00 642.00
IUUC-Oba-075635 Oryza barthii 51.55 0.00e+00 819.00
IUUC-Obr-076897 Oryza brachyantha 52.54 0.00e+00 858.00
IUUC-Ogl-077555 Oryza glaberrima 51.55 0.00e+00 819.00
IUUC-Ogu-078724 Oryza glumaepatula 51.65 0.00e+00 822.00
IUUC-Oin-080030 Oryza indica 51.65 0.00e+00 822.00
IUUC-Olo-080687 Oryza longistaminata 48.56 0.00e+00 771.00
IUUC-Ome-081867 Oryza meridionalis 51.86 0.00e+00 823.00
IUUC-Oni-082559 Oryza nivara 51.55 0.00e+00 819.00
IUUC-Opu-083332 Oryza punctata 50.32 0.00e+00 748.00
IUUC-Oru-084455 Oryza rufipogon 51.55 0.00e+00 820.00
IUUC-Osa-085793 Oryza sativa 51.55 0.00e+00 820.00
IUUC-Ola-087395 Oryzias latipes 51.69 6.00e-107 381.00
IUUC-Olu-087768 Ostreococcus lucimarinus 43.77 0.00e+00 657.00
IUUC-Oga-088574 Otolemur garnettii 39.02 0.00e+00 629.00
IUUC-Oar-089453 Ovis aries 38.81 0.00e+00 647.00
IUUC-Ptr-090694 Pan troglodytes 39.70 0.00e+00 634.00
IUUC-Pan-092420 Papio anubis 39.66 0.00e+00 635.00
IUUC-Psi-093683 Pelodiscus sinensis 40.09 0.00e+00 646.00
IUUC-Pma-094197 Petromyzon marinus 41.05 2.00e-41 160.00
IUUC-Pno-094783 Phaeosphaeria nodorum 34.59 2.00e-152 532.00
IUUC-Pfo-096299 Poecilia formosa 39.58 2.00e-178 619.00
IUUC-Pab-098706 Pongo abelii 39.64 0.00e+00 638.00
IUUC-Pop-099275 Populus trichocarpa 53.22 0.00e+00 886.00
IUUC-Pca-100796 Procavia capensis 33.45 1.00e-125 443.00
IUUC-Ppe-101861 Prunus persica 53.09 0.00e+00 915.00
IUUC-Pva-103241 Pteropus vampyrus 37.98 1.00e-166 579.00
IUUC-Pgr-103432 Puccinia graminis 33.50 5.00e-146 511.00
IUUC-Ptt-103742 Puccinia triticina 35.82 2.00e-128 452.00
IUUC-Pte-104069 Pyrenophora teres 35.18 6.00e-149 521.00
IUUC-Pyt-104650 Pyrenophora triticirepentis 35.18 7.00e-156 543.00
IUUC-Rno-105219 Rattus norvegicus 39.13 4.00e-179 621.00
IUUC-Sce-106271 Saccharomyces cerevisiae 33.90 3.00e-150 525.00
IUUC-Sha-107550 Sarcophilus harrisii 39.32 0.00e+00 634.00
IUUC-Sja-107664 Schizosaccharomyces japonicus 34.44 4.00e-152 531.00
IUUC-Spo-108239 Schizosaccharomyces pombe 34.18 3.00e-157 548.00
IUUC-Ssl-108626 Sclerotinia sclerotiorum 34.79 1.00e-160 559.00
IUUC-Smo-109477 Selaginella moellendorffii 58.65 0.00e+00 1009.00
IUUC-Sit-110000 Setaria italica 50.57 0.00e+00 828.00
IUUC-Sly-111595 Solanum lycopersicum 53.90 0.00e+00 900.00
IUUC-Stu-112516 Solanum tuberosum 53.33 0.00e+00 891.00
IUUC-Sar-113195 Sorex araneus 44.48 6.00e-120 424.00
IUUC-Sbi-114465 Sorghum bicolor 50.64 0.00e+00 836.00
IUUC-Sre-115006 Sporisorium reilianum 33.12 3.00e-147 515.00
IUUC-Ssc-115929 Sus scrofa 39.59 0.00e+00 631.00
IUUC-Tgu-117282 Taeniopygia guttata 44.44 1.00e-132 466.00
IUUC-Tru-118406 Takifugu rubripes 39.91 1.00e-176 613.00
IUUC-Tsy-119170 Tarsius syrichta 38.87 5.00e-179 620.00
IUUC-Tni-119721 Tetraodon nigroviridis 39.79 1.00e-167 583.00
IUUC-Tca-121761 Theobroma cacao 54.75 0.00e+00 954.00
IUUC-Tre-121908 Trichoderma reesei 36.02 3.00e-157 548.00
IUUC-Tvi-122547 Trichoderma virens 35.45 3.00e-157 548.00
IUUC-Tae-125433 Triticum aestivum 49.22 0.00e+00 807.00
IUUC-Tur-126811 Triticum urartu 51.55 0.00e+00 805.00
IUUC-Tme-126987 Tuber melanosporum 36.05 8.00e-163 566.00
IUUC-Tbe-127315 Tupaia belangeri 46.28 2.00e-111 396.00
IUUC-Ttr-129165 Tursiops truncatus 30.15 4.00e-70 259.00
IUUC-Uma-129651 Ustilago maydis 33.27 1.00e-148 520.00
IUUC-Vda-129973 Verticillium dahliae 35.65 1.00e-151 530.00
IUUC-Vpa-130163 Vicugna pacos 31.97 4.00e-64 239.00
IUUC-Vvi-131402 Vitis vinifera 53.52 0.00e+00 921.00
IUUC-Xtr-132296 Xenopus tropicalis 39.58 0.00e+00 642.00
IUUC-Xma-133028 Xiphophorus maculatus 39.64 8.00e-175 607.00
IUUC-Yli-134484 Yarrowia lipolytica 38.01 1.00e-131 463.00
IUUC-Zma-135938 Zea mays 49.28 0.00e+00 835.00
Created Date 25-Jun-2017

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