iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014578

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

BRADI_1g43097

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G43097	BRADI1G43097.1	BRADI1G43097.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-15	55.0	359	391

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlr 31
           H ++vt+l++    + t+l+s+s Dgt+k+WD r
   Q: 359  HDGDVTDLSLsqwmT-TRLASASKDGTVKIWDDR 391
           9999***97765344.99**************55 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASPSGNPTP NPNAPFELNR LFKPSPNPNH PTTVPTTTGI FPGAPPGAPM ASGPPGPFSY 60
PTATPPFHRN PYLHYPNDPH AVHLPVTAYA NPNPTPNPIP SSNPNPGARL MQLLGNTAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTCTTCCC TCTCTTCCTC CTCGCTCCAC CCCCTTCCTC TACGCACACT CGTCTTCCTC 60
CTCCATTCAG CGCACACTCC CTTGCTCCAG ATCCTCTTCC CAACGACTCC ATCGAGTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

bdi:100821480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	84.66	0.00e+00	2025.00
IUUC-Atr-002815	Amborella trichopoda	54.02	0.00e+00	636.00
IUUC-Aly-005827	Arabidopsis lyrata	60.37	9.00e-166	577.00
IUUC-Bra-017692	Brassica rapa	45.78	0.00e+00	920.00
IUUC-Gma-043145	Glycine max	64.12	0.00e+00	657.00
IUUC-Hvu-047656	Hordeum vulgare	85.34	0.00e+00	2130.00
IUUC-Lpe-051603	Leersia perrieri	74.79	0.00e+00	1820.00
IUUC-Loc-051778	Lepisosteus oculatus	26.26	9.00e-21	95.90
IUUC-Mtr-057751	Medicago truncatula	52.60	4.00e-171	595.00
IUUC-Oba-075599	Oryza barthii	73.98	0.00e+00	1920.00
IUUC-Obr-076020	Oryza brachyantha	80.87	0.00e+00	1868.00
IUUC-Ogl-077923	Oryza glaberrima	75.99	0.00e+00	1929.00
IUUC-Ogu-079010	Oryza glumaepatula	73.98	0.00e+00	1899.00
IUUC-Oin-079723	Oryza indica	77.41	0.00e+00	1826.00
IUUC-Olo-080788	Oryza longistaminata	78.35	0.00e+00	1859.00
IUUC-Ome-081610	Oryza meridionalis	73.69	0.00e+00	1910.00
IUUC-Oni-082533	Oryza nivara	73.98	0.00e+00	1917.00
IUUC-Opu-083811	Oryza punctata	76.38	0.00e+00	1901.00
IUUC-Oru-084729	Oryza rufipogon	74.27	0.00e+00	1921.00
IUUC-Osa-086170	Oryza sativa	75.87	0.00e+00	1927.00
IUUC-Ppa-095912	Physcomitrella patens	53.86	3.00e-125	443.00
IUUC-Sit-110226	Setaria italica	74.25	0.00e+00	1828.00
IUUC-Tca-121627	Theobroma cacao	68.98	0.00e+00	645.00
IUUC-Tae-125636	Triticum aestivum	85.77	0.00e+00	2159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence