iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095725

Ensembl Protein ID

PP1S245_50V6.1

UniProt Accession

A9TJL1; A9TJL1_PHYPA

Genbank Protein ID

EDQ56398.1

Protein Name

SNF2 family DNA-dependent ATPase

Genbank Nucleotide ID

DS545134

Gene Name

CHR1535; PHYPADRAFT_93608

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S245_50V6	PP1S245_50V6.1	PP1S245_50V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-08	34.9	341	389

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..CrewfHpaClklsveeelpnsekwiCpkC 51
           +vC vC+ +g+ +  ++ C+   C+e+fH  Clk +  ++ p+ + w Cp C
   Q: 341  EVCSVCEFAGAAD-LMLLCDGenCEEAFHSFCLKFP-LQTIPEGD-WLCPLC 389
           79*********98.699998788*************.*******7.****** PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGEQVKDGLS NRLRRIVKQE RYYGEEASSE GDKSEIELGS LREVIDKEQS VQKGKKRTLR 60
AGKEGKEGQA EDGKAEHTCG MEKSVKSTSG TPQLKNSKGS RRMKRRTSDR VGKKFEEEHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGAAC AGGTTAAAGA TGGTCTTTCT AATAGGTTAA GAAGAATTGT AAAACAGGAA 60
AGGTATTATG GAGAAGAAGC TAGTTCCGAA GGGGACAAAT CAGAAATTGA ACTAGGAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_93608

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence