iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121082

Ensembl Protein ID

EOY15349

UniProt Accession

A0A061FLH6; A0A061FLH6_THECC

Genbank Protein ID

EOY15349.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034441

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034441	EOY15349	EOY15349

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.00e-08	33.6	146	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++ +++ p C Hvfh dC+ +w         + +CP+Cr
   Q: 146  CAVCLNEFedDETLRLIPkCSHVFHPDCIDAW------LLSHSTCPVCR 188
           ********65333888889*************......89999*****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNRGDCSRSF LRLRRQNHGL PCMARANSIL FFLCFFSLST SQSQTIPAPP PPSNSYEPVG 60
PKFNPSMAIV MVVLVTAFFF MGFFSVYIRQ CAQRRMRGGN WDASVNFGRP SRRLTRGLDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATACAATCGC ATACATGTCG AGGTTGGTAG AAATAGACAA AATGGAATTA GCAAATTTTC 60
CTCGTCTTAA CCGAACACTG CTTTCCTAGT GCTTACGTGT CAAAATTTTC CACGGGCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006388	Arabidopsis lyrata	50.14	6.00e-71	260.00
IUUC-Ath-007498	Arabidopsis thaliana	49.58	1.00e-73	269.00
IUUC-Bol-015643	Brassica oleracea	48.77	1.00e-78	285.00
IUUC-Bra-017965	Brassica rapa	48.10	2.00e-79	288.00
IUUC-Gma-043872	Glycine max	50.14	2.00e-69	254.00
IUUC-Mtr-057905	Medicago truncatula	51.86	8.00e-66	243.00
IUUC-Oga-088543	Otolemur garnettii	27.68	1.00e-14	73.20
IUUC-Ppa-095506	Physcomitrella patens	47.14	3.00e-29	122.00
IUUC-Pop-099890	Populus trichocarpa	51.01	7.00e-60	223.00
IUUC-Ppe-102023	Prunus persica	47.17	9.00e-71	259.00
IUUC-Sly-111277	Solanum lycopersicum	49.37	3.00e-82	297.00
IUUC-Stu-112280	Solanum tuberosum	50.91	4.00e-86	310.00
IUUC-Sar-113682	Sorex araneus	29.01	3.00e-13	67.80
IUUC-Tur-126779	Triticum urartu	43.60	2.00e-36	144.00
IUUC-Vpa-130536	Vicugna pacos	28.02	4.00e-13	68.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence