iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095232

Ensembl Protein ID

PP1S27_42V6.1

UniProt Accession

A9RT33; A9RT33_PHYPA

Genbank Protein ID

EDQ77742.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544916

Gene Name

PHYPADRAFT_119089

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S27_42V6	PP1S27_42V6.1	PP1S27_42V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-28	96.6	300	329
E3 adaptor/Cullin RING/APC_C/CDC20	4.20e-127	424.4	155	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+ +v++l++ ++ + l+sG++D+ +++WD
   Q: 300  HEQEVCGLKWsPSgHQLASGGNDNLLYIWD 329
           99*********66699************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsa 97
           e+ ldap+l dd+ylnLldWs++nvla+aLg++vylw+a+t ++ +l   +e+  vtsv+w ++g +lavG +++ v+++D +e +++r+l+ghsa
   Q: 155  ERTLDAPDLLDDYYLNLLDWSANNVLAIALGNTVYLWDATTCSIAELLTADEDGPVTSVHWAPDGRYLAVGLNNADVQLWDSQELRQLRSLKGHSA 250
           689********************************************************************************************* PP
   S: 98   rvgaLsWnaevlssGsrdgeilhrdvr...........vkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.....P.lkkfk 176
           rvg+L+Wn  vlssGsrd +i  +d             ++++ + +++ah+qevCGlkw+ ++++LasGGnDn + +wdas  +     P l + +
   Q: 251  RVGSLAWNGPVLSSGSRDSSIINHDALrfcmdilmevrIRDHVIGRMEAHEQEVCGLKWSPSGHQLASGGNDNLLYIWDASAASnqgpsPyLLRLD 346
           ********************998885449999999988*****************************************99877789775356889 PP
   S: 177  ehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvls 272
           +h+aavka+aw+P+q++lLasGGGtaDrcikfwnt tg +l++idt+sqvc l wsk+++e++s+hGf++n++ lwkyps+ k+ael+gh++Rvl+
   Q: 347  DHRAAVKALAWCPFQSNLLASGGGTADRCIKFWNTHTGVCLNSIDTQSQVCALQWSKHEREILSSHGFSQNQLCLWKYPSMVKLAELTGHTSRVLH 442
           ************************************************************************************************ PP
   S: 273  lalspdgeaivtaagDetlrfwklfdkk 300
           la spdg +i++aagDetlrfwk+f   
   Q: 443  LAQSPDGYTIASAAGDETLRFWKVFGDP 470
           *************************765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MESIVQGMAK VFHSPTRSDA RNDRHPLREQ FSPEPLGRKT PKSKTPGRPS DRFITDRSAM 60
DFNIANYMLA GLEENAVNNG SVHSPSKEEY KKQLAENLLR CNNHQRQSRI LAFKSKPPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCTGTA TACTTCCCCT TGGAATTTGG CGTACTCTAT TTCTTGCTAG GGTTGCGTGG 60
GCGTACTGTG TAGGAATCGA TTGTGCAGGG TATGGCGAAG GTTTTCCATT CACCCACCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

ppp:PHYPADRAFT_119089

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence