iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095923

Ensembl Protein ID

PP1S2_365V6.1

UniProt Accession

A9RD19; A9RD19_PHYPA

Genbank Protein ID

EDQ83197.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544891

Gene Name

PHYPADRAFT_64305

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S2_365V6	PP1S2_365V6.1	PP1S2_365V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-10	41.2	2	36

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tcl.af..sd.tllvsGsdDgtikvWDlrtgvllk 37
           +c+ +f   d ++l +GsdD t kvWD+ t+ + +
   Q: 2    NCVgSFsgGDqPYLMTGSDDQTAKVWDYQTQICAQ 36
           677558886679*****************999987 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MNCVGSFSGG DQPYLMTGSD DQTAKVWDYQ TQICAQTLGR SQNISAVAFH PDLPIILTGS 60
EYGTVRIWHS TKYRLGNIIQ YGLERVWALG YNKGSNSLVR CIVVCGDGHY IIHTALAWRN 120

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Nucleotide Sequence
(Fasta)

ATGAATTGTG TGGGGTCCTT TAGTGGTGGT GATCAACCGT ATCTCATGAC TGGTTCAGAT 60
GATCAAACTG CGAAGGTACT GACTCTATCT GGTCTGTTGC TAATCTTGAT TCTGCAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

ppp:PHYPADRAFT_64305

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence