iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095283

Ensembl Protein ID

PP1S364_54V6.1

UniProt Accession

A9TXU9; A9TXU9_PHYPA

Genbank Protein ID

EDQ51764.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545251

Gene Name

PHYPADRAFT_98720

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S364_54V6	PP1S364_54V6.1	PP1S364_54V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-09	38.0	449	479

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H d +t++a   sd ++l s+s Dgt++vW+
   Q: 449  HDDVITDFAVpfSDpCRLTSASKDGTVRVWE 479
           99*****99889999***************8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGAPGPPGVY DLQKYSRGPT QSPHSPQLGS YQPSSQVSSF HYQLPSRDSN PLGSNPPSSY 60
QPSSYASSNL QCTNYTYFGT QNQQSGSPVC DSQKFMHNVQ DQGPRTQAPY STALFNQQPG 120

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Nucleotide Sequence
(Fasta)

ATGGGGGCTC CAGGTCCACC CGGGGTTTAT GATCTTCAAA AGTACTCAAG AGGACCAACT 60
CAAAGTCCTC ACTCACCTCA ATTGGGTAGC TATCAACCTT CATCTCAAGT CAGTTCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

ppp:PHYPADRAFT_98720

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence