iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108724

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377567

Gene Name

SELMODRAFT_79275

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_79275	EFJ36173	EFJ36173

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-25	88.6	670	699
UBD/Beta-Prp	2.70e-47	162.1	619	755

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  +t+++f ++ t+l+++s D+t++vWD
   Q: 670  HTFLITDVRFsPNsTRLATSSFDKTVRVWD 699
           66679******777**************** PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvnc 142
           g  + +l   +++v ++ fs+dgk+l++++ D+ + +w+++t k  +tl++h++ +++++fsp++ +l++ s d+t+rvwd ++ + +  t++gh+ +v++
   Q: 619  GFEVGCLRASTSKVVCCHFSSDGKLLASAGHDKKAVLWNMDTLKLKSTLEEHTFLITDVRFSPNSTRLATSSFDKTVRVWDADNPSYSLRTFTGHQTSVMS 719
           4456777778888***********************************************************************888888*********** PP
   S: 143  vvvhpdg.nllvsGslDrtvrlWdlktgkllrtltg 177
           + +hp + +ll s+  D+ +r W++++g + r ++g
   Q: 720  LDFHPVNeDLLCSCDGDSEIRYWSVSQGVCTRVFKG 755
           **********************************88 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIHDYL VKKNLQASAK AFQTEGKVSG DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQQLKAREQQ QQHQHLQHQQ QQQQIQQQQH QQQHQQQLQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAAA GTAACTGGGA AGCCGATAAG ATGTAAGCGT TTGGATTTCT TTTTGTCCTT 60
CTCGTTGTTT GAGTAAGATT GGGATTGGCA GGCTCGATGT TTATATACAC GACTATCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

smo:SELMODRAFT_79275

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	47.38	1.00e-151	530.00
IUUC-Atr-002973	Amborella trichopoda	58.18	0.00e+00	637.00
IUUC-Aly-006446	Arabidopsis lyrata	53.64	0.00e+00	674.00
IUUC-Ath-006594	Arabidopsis thaliana	52.41	0.00e+00	673.00
IUUC-Bdi-014395	Brachypodium distachyon	50.82	5.00e-161	560.00
IUUC-Bra-017481	Brassica rapa	54.22	0.00e+00	693.00
IUUC-Gma-043858	Glycine max	57.49	0.00e+00	671.00
IUUC-Hvu-047499	Hordeum vulgare	58.35	4.00e-135	473.00
IUUC-Mtr-058613	Medicago truncatula	65.84	2.00e-159	555.00
IUUC-Oba-075419	Oryza barthii	58.58	4.00e-133	468.00
IUUC-Obr-076118	Oryza brachyantha	62.64	8.00e-151	526.00
IUUC-Ogl-077064	Oryza glaberrima	62.93	3.00e-152	531.00
IUUC-Ogu-078816	Oryza glumaepatula	57.57	4.00e-128	451.00
IUUC-Oni-082753	Oryza nivara	59.17	5.00e-134	471.00
IUUC-Opu-083283	Oryza punctata	56.42	6.00e-125	441.00
IUUC-Osa-086142	Oryza sativa	63.16	1.00e-152	533.00
IUUC-Ppa-095985	Physcomitrella patens	77.33	0.00e+00	640.00
IUUC-Ppe-102018	Prunus persica	56.25	0.00e+00	671.00
IUUC-Stu-112404	Solanum tuberosum	63.61	3.00e-145	508.00
IUUC-Tae-124426	Triticum aestivum	49.74	3.00e-162	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence