iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095831

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544970

Gene Name

PHYPADRAFT_228776

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S37_28V6	PP1S37_28V6.1	PP1S37_28V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-26	89.6	542	580
E3 activity/RING/U-box	3.50e-08	34.1	31	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllks 38
           gH   v+ ++f s++ lvs+s D t+++WD+ t++++++
   Q: 542  GHRKAVSYVKFmSSNELVSASTDSTLRLWDVQTDTSVQT 580
           79999******9779******************999885 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrli 65
           +flCpI l  M+d   + +G+ +  s+I  +l++ ++ cP + q lt + l+Pn  l +l 
   Q: 31   DFLCPICLHTMKDAFLTRCGHNFCYSCIMTHLKNRNN-CPCCAQYLTIDLLMPNFLLTKLM 90
           7**********************************99.****************9987765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAFENEESFA ASSVEEKYES AVRARANMDR DFLCPICLHT MKDAFLTRCG HNFCYSCIMT 60
HLKNRNNCPC CAQYLTIDLL MPNFLLTKLM NELSASMMLK NASPAEQLRL ALEQDADLPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTTG AAAATGAAGA GTCATTCGCA GCGTCTTCCG TAGAGGAGAA GTACGAATCT 60
GCTGTCCGCG CCAGGGCAAA CATGGACAGA GACTTTTTAT GCCCAATTTG CCTCCACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_228776

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence