iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005728

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_896878

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_300848.1	scaffold_300848.1	scaffold_300848.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-08	34.2	126	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++f +++  + CgH+f++ C+++        s +++CP+Cr
   Q: 126  CPICLCPFTEEVS-TKCGHIFCKACIKNA------LSLQAKCPTCR 164
           ********99665.************888......9*********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTSRVVRTNM RLRRRDGVNV SQNEHQEGTE QAPTVPQIVS TPPRVNIVAI EDDDDVVEST 60
ASAFAQAKNK SRSARRGPVV VDVESGGTNR GTRRRSDQTS ADSVELNKPR KSKAVAPPVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGGCTTAA CTCTGTGTTG AAAGATGACT TCTCGGGTGG TGAGGACTAA TATGAGACTT 60
CGAAGGAGGG ATGGTGTGAA TGTGTCTCAA AACGAACACC AGGAAGGGAC TGAACAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_896878

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000858	Aegilops tauschii	49.28	7.00e-17	80.10
IUUC-Apl-004120	Anas platyrhynchos	39.34	2.00e-10	58.20
IUUC-Ath-007366	Arabidopsis thaliana	85.80	3.00e-72	263.00
IUUC-Bci-013998	Botrytis cinerea	38.46	2.00e-07	49.70
IUUC-Bol-016562	Brassica oleracea	71.43	2.00e-47	180.00
IUUC-Bra-016652	Brassica rapa	68.90	3.00e-49	188.00
IUUC-Cfa-020868	Canis familiaris	36.14	4.00e-10	57.00
IUUC-Cin-025749	Ciona intestinalis	42.86	2.00e-10	58.20
IUUC-Dor-030898	Dipodomys ordii	24.88	7.00e-11	60.10
IUUC-Ete-032694	Echinops telfairi	39.34	1.00e-10	58.90
IUUC-Fal-037382	Ficedula albicollis	39.34	3.00e-10	57.80
IUUC-Gga-040493	Gallus gallus	39.34	2.00e-10	58.50
IUUC-Gac-042194	Gasterosteus aculeatus	33.33	4.00e-11	60.50
IUUC-Hvu-047337	Hordeum vulgare	46.59	6.00e-17	80.50
IUUC-Lpe-050920	Leersia perrieri	56.14	1.00e-16	79.70
IUUC-Loc-051907	Lepisosteus oculatus	44.26	1.00e-10	58.90
IUUC-Meu-056654	Macropus eugenii	41.67	2.00e-10	58.20
IUUC-Mga-059303	Meleagris gallopavo	39.34	2.00e-10	58.50
IUUC-Mdo-062968	Monodelphis domestica	40.98	7.00e-11	59.30
IUUC-Oba-075460	Oryza barthii	52.78	2.00e-18	84.70
IUUC-Obr-076349	Oryza brachyantha	56.14	9.00e-17	80.10
IUUC-Ogl-077094	Oryza glaberrima	36.31	1.00e-19	89.40
IUUC-Ogu-078677	Oryza glumaepatula	34.91	7.00e-19	86.70
IUUC-Oin-079992	Oryza indica	36.31	1.00e-19	89.40
IUUC-Olo-080257	Oryza longistaminata	54.17	1.00e-18	85.50
IUUC-Ome-081943	Oryza meridionalis	36.31	1.00e-19	89.70
IUUC-Oni-082671	Oryza nivara	52.78	2.00e-18	84.70
IUUC-Opu-083644	Oryza punctata	51.39	8.00e-18	83.20
IUUC-Oru-084650	Oryza rufipogon	52.78	2.00e-18	84.70
IUUC-Osa-086110	Oryza sativa	36.31	1.00e-19	89.40
IUUC-Ola-086970	Oryzias latipes	37.70	9.00e-11	59.30
IUUC-Pma-094118	Petromyzon marinus	39.13	6.00e-10	54.30
IUUC-Ppa-095498	Physcomitrella patens	50.00	5.00e-17	80.50
IUUC-Pfo-097412	Poecilia formosa	39.34	5.00e-11	60.10
IUUC-Sha-107487	Sarcophilus harrisii	41.67	6.00e-11	59.70
IUUC-Sja-107944	Schizosaccharomyces japonicus	42.86	8.00e-08	50.10
IUUC-Ssl-108580	Sclerotinia sclerotiorum	30.77	1.00e-08	53.90
IUUC-Smo-108908	Selaginella moellendorffii	43.86	1.00e-11	62.40
IUUC-Sre-115218	Sporisorium reilianum	54.29	3.00e-05	43.10
IUUC-Tgu-117264	Taeniopygia guttata	39.34	3.00e-10	57.40
IUUC-Tru-117663	Takifugu rubripes	39.34	2.00e-10	57.40
IUUC-Tae-124872	Triticum aestivum	35.09	3.00e-18	84.70
IUUC-Tur-126408	Triticum urartu	35.67	5.00e-18	84.00
IUUC-Uma-129620	Ustilago maydis	41.10	1.00e-07	50.80
IUUC-Xtr-132879	Xenopus tropicalis	44.07	6.00e-10	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence