iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110970

Ensembl Protein ID

Solyc01g103740.2.1

UniProt Accession

K4B1U9; K4B1U9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g103740.2	Solyc01g103740.2.1	Solyc01g103740.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-08	33.8	422	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +++  s+   ++sGs Dgt+++W++ tg++++
   Q: 422  GHKGPVVSISTeSTgQWIASGSSDGTVRIWEVETGRCVR 460
           8********99977799********************86 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKVPRRSARQ KNLQKDAEKE EAINLLEQKE NTEEAVERSK DEEAVEEENF VESPVVSDDD 60
DDEDFSDDGS LGESGSEDSH LSGEEDVFVS SDNEDSFDAK SDDVSGNGAS GSGRDDTGHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACGGAAAA TTACTACAAA ATAAGTAGAG AGGACATTAA AACCCTAGAG CATCGTTCTC 60
CTCTTAAAAC CCTTGCAACT TCACTCCTCG TTTTCTTCTT CTTCTGTAAC AGAGATGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	71.63	7.00e-146	510.00
IUUC-Aml-001507	Ailuropoda melanoleuca	46.40	2.00e-85	309.00
IUUC-Atr-003141	Amborella trichopoda	69.68	4.00e-142	497.00
IUUC-Apl-003545	Anas platyrhynchos	43.59	2.00e-73	269.00
IUUC-Aly-005649	Arabidopsis lyrata	76.47	6.00e-162	563.00
IUUC-Ath-007625	Arabidopsis thaliana	68.80	7.00e-154	536.00
IUUC-Ago-007958	Ashbya gossypii	40.77	2.00e-76	280.00
IUUC-Acl-008344	Aspergillus clavatus	43.66	2.00e-70	259.00
IUUC-Afl-008616	Aspergillus flavus	40.34	1.00e-71	263.00
IUUC-Afu-009083	Aspergillus fumigatus	43.95	3.00e-66	245.00
IUUC-Ani-009365	Aspergillus nidulans	43.23	8.00e-72	264.00
IUUC-Ang-009796	Aspergillus niger	43.03	9.00e-67	247.00
IUUC-Aor-010015	Aspergillus oryzae	40.34	1.00e-71	263.00
IUUC-Ate-010537	Aspergillus terreus	43.23	2.00e-72	266.00
IUUC-Bgr-012286	Blumeria graminis	41.13	1.00e-71	263.00
IUUC-Bta-013569	Bos taurus	47.52	2.00e-82	300.00
IUUC-Bci-013820	Botrytis cinerea	43.06	9.00e-63	234.00
IUUC-Bdi-014895	Brachypodium distachyon	72.30	1.00e-148	519.00
IUUC-Bol-016099	Brassica oleracea	78.65	1.00e-165	575.00
IUUC-Bra-017174	Brassica rapa	78.49	2.00e-167	582.00
IUUC-Cel-018201	Caenorhabditis elegans	42.65	7.00e-72	264.00
IUUC-Cja-019009	Callithrix jacchus	46.65	8.00e-85	307.00
IUUC-Cfa-020173	Canis familiaris	41.39	7.00e-73	267.00
IUUC-Cpo-021796	Cavia porcellus	47.01	1.00e-83	303.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	52.45	2.00e-104	372.00
IUUC-Csa-023440	Chlorocebus sabaeus	46.11	4.00e-86	311.00
IUUC-Cin-025782	Ciona intestinalis	47.14	5.00e-87	315.00
IUUC-Csv-026352	Ciona savignyi	47.19	3.00e-89	322.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	40.66	6.00e-65	241.00
IUUC-Cne-027004	Cryptococcus neoformans	44.93	1.00e-83	303.00
IUUC-Cme-027242	Cyanidioschyzon merolae	34.88	2.00e-49	189.00
IUUC-Dre-028658	Danio rerio	45.34	4.00e-86	311.00
IUUC-Dno-028883	Dasypus novemcinctus	49.41	2.00e-89	323.00
IUUC-Dor-031031	Dipodomys ordii	46.20	7.00e-86	310.00
IUUC-Dse-031443	Dothistroma septosporum	40.71	3.00e-69	255.00
IUUC-Dme-031786	Drosophila melanogaster	41.65	1.00e-82	300.00
IUUC-Eca-033677	Equus caballus	47.93	3.00e-87	315.00
IUUC-Eeu-035310	Erinaceus europaeus	47.23	1.00e-88	320.00
IUUC-Fca-035888	Felis catus	47.24	6.00e-82	297.00
IUUC-Fal-037438	Ficedula albicollis	48.15	6.00e-58	218.00
IUUC-Fox-037973	Fusarium oxysporum	42.70	2.00e-72	266.00
IUUC-Fso-038187	Fusarium solani	41.87	2.00e-70	259.00
IUUC-Gmo-039114	Gadus morhua	41.07	9.00e-71	260.00
IUUC-Ggr-039746	Gaeumannomyces graminis	40.94	2.00e-77	282.00
IUUC-Gga-040631	Gallus gallus	46.27	4.00e-15	74.70
IUUC-Gac-042582	Gasterosteus aculeatus	45.61	3.00e-76	278.00
IUUC-Gma-044307	Glycine max	74.03	8.00e-162	563.00
IUUC-Ggo-045587	Gorilla gorilla	46.13	6.00e-86	310.00
IUUC-Hsa-046319	Homo sapiens	46.11	8.00e-86	310.00
IUUC-Hvu-047526	Hordeum vulgare	72.25	1.00e-147	516.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	45.86	3.00e-84	305.00
IUUC-Kpa-049221	Komagataella pastoris	40.88	6.00e-70	258.00
IUUC-Lch-049640	Latimeria chalumnae	46.97	2.00e-86	313.00
IUUC-Lpe-051135	Leersia perrieri	74.78	1.00e-149	522.00
IUUC-Loc-051930	Lepisosteus oculatus	48.57	2.00e-89	322.00
IUUC-Lma-053290	Leptosphaeria maculans	44.32	2.00e-65	243.00
IUUC-Laf-053903	Loxodonta africana	46.29	6.00e-82	297.00
IUUC-Mcc-055471	Macaca mulatta	46.11	3.00e-86	312.00
IUUC-Meu-056190	Macropus eugenii	46.63	1.00e-84	306.00
IUUC-Mor-057135	Magnaporthe oryzae	39.86	8.00e-71	261.00
IUUC-Mpo-057475	Magnaporthe poae	38.77	9.00e-71	260.00
IUUC-Mtr-058689	Medicago truncatula	73.43	6.00e-140	490.00
IUUC-Mla-059149	Melampsora laricipopulina	44.19	6.00e-79	288.00
IUUC-Mga-059645	Meleagris gallopavo	45.65	4.00e-09	54.30
IUUC-Mvi-060485	Microbotryum violaceum	43.16	3.00e-65	243.00
IUUC-Mmr-061674	Microcebus murinus	46.38	1.00e-79	290.00
IUUC-Mdo-062973	Monodelphis domestica	44.83	1.00e-83	303.00
IUUC-Mmu-064180	Mus musculus	47.60	5.00e-87	314.00
IUUC-Mac-064535	Musa acuminata	80.24	1.00e-170	593.00
IUUC-Mpu-066406	Mustela putorius furo	46.46	3.00e-87	315.00
IUUC-Mlu-067795	Myotis lucifugus	48.80	2.00e-80	293.00
IUUC-Nfi-068516	Neosartorya fischeri	41.42	7.00e-61	228.00
IUUC-Ncr-068767	Neurospora crassa	41.60	2.00e-60	226.00
IUUC-Opr-071084	Ochotona princeps	46.02	2.00e-53	202.00
IUUC-Ont-071614	Oreochromis niloticus	43.80	2.00e-83	302.00
IUUC-Oba-075980	Oryza barthii	71.89	8.00e-148	516.00
IUUC-Obr-076799	Oryza brachyantha	73.29	3.00e-153	535.00
IUUC-Ogl-077134	Oryza glaberrima	73.29	1.00e-148	519.00
IUUC-Ogu-078655	Oryza glumaepatula	71.89	7.00e-148	516.00
IUUC-Oin-079654	Oryza indica	73.29	3.00e-148	518.00
IUUC-Olo-080706	Oryza longistaminata	72.16	2.00e-148	518.00
IUUC-Ome-081716	Oryza meridionalis	71.62	4.00e-148	518.00
IUUC-Oni-082508	Oryza nivara	72.16	1.00e-148	519.00
IUUC-Opu-083707	Oryza punctata	73.00	6.00e-148	516.00
IUUC-Oru-084453	Oryza rufipogon	72.16	2.00e-148	518.00
IUUC-Osa-085811	Oryza sativa	71.89	2.00e-148	518.00
IUUC-Ola-087361	Oryzias latipes	47.47	3.00e-87	315.00
IUUC-Oga-088015	Otolemur garnettii	47.01	2.00e-85	309.00
IUUC-Oar-090058	Ovis aries	37.86	2.00e-29	123.00
IUUC-Ptr-090631	Pan troglodytes	41.16	3.00e-57	214.00
IUUC-Pan-092306	Papio anubis	46.11	3.00e-86	312.00
IUUC-Pma-094622	Petromyzon marinus	46.00	2.00e-85	309.00
IUUC-Pno-094794	Phaeosphaeria nodorum	38.44	1.00e-56	214.00
IUUC-Ppa-095528	Physcomitrella patens	62.13	4.00e-135	474.00
IUUC-Pfo-096682	Poecilia formosa	44.29	5.00e-85	308.00
IUUC-Pab-097939	Pongo abelii	45.39	4.00e-69	254.00
IUUC-Pop-099043	Populus trichocarpa	80.48	6.00e-137	480.00
IUUC-Pca-100333	Procavia capensis	47.23	1.00e-86	313.00
IUUC-Ppe-102078	Prunus persica	74.86	4.00e-150	524.00
IUUC-Pgr-103525	Puccinia graminis	44.35	2.00e-71	263.00
IUUC-Ptt-103929	Puccinia triticina	44.35	2.00e-71	263.00
IUUC-Pte-104029	Pyrenophora teres	43.61	1.00e-76	280.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	43.61	1.00e-76	280.00
IUUC-Rno-105248	Rattus norvegicus	47.90	1.00e-87	317.00
IUUC-Sce-106381	Saccharomyces cerevisiae	40.93	8.00e-75	274.00
IUUC-Sha-106519	Sarcophilus harrisii	45.94	4.00e-86	311.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	41.85	5.00e-68	251.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.82	2.00e-67	249.00
IUUC-Smo-108881	Selaginella moellendorffii	66.86	5.00e-129	454.00
IUUC-Sit-110551	Setaria italica	74.05	5.00e-153	533.00
IUUC-Stu-112593	Solanum tuberosum	96.71	0.00e+00	819.00
IUUC-Sbi-113945	Sorghum bicolor	72.75	5.00e-150	524.00
IUUC-Sre-115188	Sporisorium reilianum	41.24	2.00e-76	279.00
IUUC-Ssc-115352	Sus scrofa	47.29	2.00e-88	319.00
IUUC-Tru-117685	Takifugu rubripes	46.86	8.00e-88	317.00
IUUC-Tni-119982	Tetraodon nigroviridis	47.60	6.00e-86	311.00
IUUC-Tca-121664	Theobroma cacao	80.42	8.00e-179	619.00
IUUC-Tre-122229	Trichoderma reesei	41.99	1.00e-56	213.00
IUUC-Tvi-122576	Trichoderma virens	42.38	7.00e-58	218.00
IUUC-Tae-124110	Triticum aestivum	73.91	1.00e-138	486.00
IUUC-Tur-126781	Triticum urartu	72.49	3.00e-142	498.00
IUUC-Tme-127080	Tuber melanosporum	45.58	2.00e-86	312.00
IUUC-Ttr-128514	Tursiops truncatus	48.20	2.00e-87	315.00
IUUC-Uma-129556	Ustilago maydis	41.42	4.00e-73	269.00
IUUC-Vda-129715	Verticillium dahliae	42.74	9.00e-70	257.00
IUUC-Vvi-131211	Vitis vinifera	74.46	1.00e-179	622.00
IUUC-Xma-133883	Xiphophorus maculatus	45.61	3.00e-84	305.00
IUUC-Yli-134438	Yarrowia lipolytica	43.84	3.00e-70	259.00
IUUC-Zma-135341	Zea mays	72.59	8.00e-150	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence