iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048733

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01088432

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000006883.2	ENSSTOT00000006883.2	ENSSTOP00000006154.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-34	115.1	107	142
UBD/Beta-Prp	1.20e-50	172.4	16	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + tl++sGs D ++++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTLILSGSIDSSVRCWDCRSRR 142
           8**********5449****************99866 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
           k l++l   +++v+av+f+ dg++ +t+++D+t+k+w++  g+ ++t++gh ++vl+ + s +++ l sG+ d+ + +wd+ +gq+++ 
   Q: 16   KRLKTLDCEQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSNLCSGGGDKAVVLWDVASGQVVR- 103
           4445555555555555555555555555555555555555555555555555555555555555555555555555555555555555. PP
   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
            ++gh g vn+v++++++ l+ sGs D+ vr Wd   ++ + ++tl +   d + s+++++   e+++gs dg+v+ +dl+ 
   Q: 104  KFRGHAGKVNTVQFNEEATLILSGSIDSSVRCWDCrsRRPEPVQTLDE-ARDGISSVKVSD--HEVLAGSVDGRVRRYDLRM 182
           555555555555555555555555555555555553344445555554.555555555555..4555555555555555554 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAFPEPKPRG PELPQKRLKT LDCEQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGTLL 60
RTYSGHGYEV LDAAGSFDNS NLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTCC CTGAGCCAAA GCCTCGGGGC CCGGAGCTGC CGCAGAAACG GTTGAAGACG 60
CTGGACTGCG AGCAAGGGGC AGTACGAGCC GTGAGATTTA ACGGTGAGCG CCCTCACCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	94.59	7.00e-179	619.00
IUUC-Atr-002647	Amborella trichopoda	49.49	1.00e-89	322.00
IUUC-Aca-004948	Anolis carolinensis	79.94	6.00e-147	513.00
IUUC-Aly-006489	Arabidopsis lyrata	49.49	2.00e-81	295.00
IUUC-Ath-007099	Arabidopsis thaliana	49.83	3.00e-81	294.00
IUUC-Acl-008374	Aspergillus clavatus	36.33	2.00e-49	189.00
IUUC-Afl-008506	Aspergillus flavus	37.67	7.00e-52	197.00
IUUC-Afu-009098	Aspergillus fumigatus	33.23	3.00e-44	172.00
IUUC-Ang-009705	Aspergillus niger	33.87	2.00e-47	182.00
IUUC-Aor-010031	Aspergillus oryzae	37.67	6.00e-52	197.00
IUUC-Ame-011056	Astyanax mexicanus	73.63	2.00e-141	494.00
IUUC-Bgr-012109	Blumeria graminis	42.51	2.00e-57	215.00
IUUC-Bta-012476	Bos taurus	94.29	1.00e-178	618.00
IUUC-Bci-013860	Botrytis cinerea	35.47	2.00e-45	176.00
IUUC-Bdi-014565	Brachypodium distachyon	48.81	1.00e-86	312.00
IUUC-Bol-016204	Brassica oleracea	49.83	2.00e-81	295.00
IUUC-Bra-018093	Brassica rapa	49.83	4.00e-81	294.00
IUUC-Cel-018500	Caenorhabditis elegans	47.78	4.00e-84	304.00
IUUC-Cja-019279	Callithrix jacchus	93.97	5.00e-167	579.00
IUUC-Cfa-020516	Canis familiaris	93.97	7.00e-179	619.00
IUUC-Cpo-021427	Cavia porcellus	92.06	7.00e-166	575.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	45.82	5.00e-75	274.00
IUUC-Csa-023449	Chlorocebus sabaeus	93.02	2.00e-165	574.00
IUUC-Cin-025637	Ciona intestinalis	57.00	2.00e-106	378.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	37.41	2.00e-51	195.00
IUUC-Cne-026994	Cryptococcus neoformans	35.60	1.00e-49	189.00
IUUC-Dre-028239	Danio rerio	75.49	2.00e-134	471.00
IUUC-Dno-029408	Dasypus novemcinctus	92.70	2.00e-176	610.00
IUUC-Dor-030684	Dipodomys ordii	91.22	3.00e-111	394.00
IUUC-Dse-031344	Dothistroma septosporum	44.40	6.00e-54	204.00
IUUC-Dme-031634	Drosophila melanogaster	48.61	1.00e-77	282.00
IUUC-Ete-033126	Echinops telfairi	84.44	1.00e-157	548.00
IUUC-Eca-034356	Equus caballus	85.08	6.00e-154	536.00
IUUC-Eeu-035196	Erinaceus europaeus	91.12	3.00e-78	285.00
IUUC-Fca-036231	Felis catus	93.02	2.00e-177	613.00
IUUC-Fox-038076	Fusarium oxysporum	35.42	1.00e-54	206.00
IUUC-Fso-038093	Fusarium solani	36.51	3.00e-46	178.00
IUUC-Gmo-039056	Gadus morhua	73.31	3.00e-134	470.00
IUUC-Ggr-039981	Gaeumannomyces graminis	34.83	7.00e-45	174.00
IUUC-Gga-041042	Gallus gallus	78.14	1.00e-148	518.00
IUUC-Gac-042638	Gasterosteus aculeatus	73.86	9.00e-138	482.00
IUUC-Gma-042689	Glycine max	50.00	3.00e-89	321.00
IUUC-Ggo-044720	Gorilla gorilla	93.97	1.00e-166	578.00
IUUC-Hsa-046056	Homo sapiens	93.65	8.00e-167	578.00
IUUC-Hvu-047675	Hordeum vulgare	45.99	8.00e-84	303.00
IUUC-Lch-050634	Latimeria chalumnae	76.64	8.00e-132	462.00
IUUC-Lpe-051470	Leersia perrieri	48.81	2.00e-86	311.00
IUUC-Loc-052452	Lepisosteus oculatus	77.89	1.00e-136	478.00
IUUC-Lma-053235	Leptosphaeria maculans	40.69	4.00e-28	118.00
IUUC-Laf-054315	Loxodonta africana	93.97	9.00e-167	578.00
IUUC-Mcc-054923	Macaca mulatta	93.02	1.00e-165	575.00
IUUC-Mor-056936	Magnaporthe oryzae	38.51	6.00e-47	181.00
IUUC-Mtr-058595	Medicago truncatula	51.41	4.00e-89	320.00
IUUC-Mla-058902	Melampsora laricipopulina	40.64	3.00e-62	231.00
IUUC-Mvi-060471	Microbotryum violaceum	43.62	3.00e-72	264.00
IUUC-Mmr-061665	Microcebus murinus	94.60	1.00e-178	618.00
IUUC-Mdo-062750	Monodelphis domestica	79.59	2.00e-134	471.00
IUUC-Mmu-063750	Mus musculus	92.06	2.00e-175	607.00
IUUC-Mac-065441	Musa acuminata	50.00	3.00e-89	321.00
IUUC-Mpu-066863	Mustela putorius furo	93.65	9.00e-178	615.00
IUUC-Mlu-067645	Myotis lucifugus	92.70	5.00e-176	609.00
IUUC-Nfi-068549	Neosartorya fischeri	35.71	3.00e-48	185.00
IUUC-Ncr-068816	Neurospora crassa	36.16	7.00e-43	167.00
IUUC-Nle-069457	Nomascus leucogenys	94.60	2.00e-167	581.00
IUUC-Opr-070874	Ochotona princeps	91.78	3.00e-77	281.00
IUUC-Ont-071674	Oreochromis niloticus	74.60	1.00e-124	439.00
IUUC-Oan-073391	Ornithorhynchus anatinus	78.78	2.00e-151	527.00
IUUC-Ocu-074186	Oryctolagus cuniculus	92.38	6.00e-170	589.00
IUUC-Oba-075414	Oryza barthii	50.54	1.00e-83	303.00
IUUC-Obr-076739	Oryza brachyantha	48.29	8.00e-85	306.00
IUUC-Ogl-076962	Oryza glaberrima	49.15	7.00e-86	310.00
IUUC-Ogu-078831	Oryza glumaepatula	49.15	5.00e-86	310.00
IUUC-Oin-079985	Oryza indica	48.81	7.00e-86	310.00
IUUC-Ome-081333	Oryza meridionalis	47.83	9.00e-79	286.00
IUUC-Oni-082558	Oryza nivara	48.81	7.00e-86	310.00
IUUC-Opu-084091	Oryza punctata	49.15	3.00e-87	314.00
IUUC-Oru-085253	Oryza rufipogon	49.08	3.00e-80	291.00
IUUC-Osa-086077	Oryza sativa	48.81	7.00e-86	310.00
IUUC-Ola-086946	Oryzias latipes	72.61	1.00e-136	478.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.59	7.00e-54	203.00
IUUC-Oga-088681	Otolemur garnettii	91.64	1.00e-170	591.00
IUUC-Oar-089913	Ovis aries	93.02	6.00e-175	605.00
IUUC-Ptr-091343	Pan troglodytes	93.65	5.00e-165	572.00
IUUC-Pan-092078	Papio anubis	93.02	2.00e-165	574.00
IUUC-Psi-093190	Pelodiscus sinensis	79.42	7.00e-152	529.00
IUUC-Pno-095078	Phaeosphaeria nodorum	40.58	3.00e-55	208.00
IUUC-Ppa-095777	Physcomitrella patens	49.83	1.00e-88	319.00
IUUC-Pfo-097153	Poecilia formosa	75.58	1.00e-131	462.00
IUUC-Pab-098307	Pongo abelii	93.67	2.00e-165	574.00
IUUC-Pop-099315	Populus trichocarpa	51.19	3.00e-83	301.00
IUUC-Pca-100538	Procavia capensis	92.57	1.00e-148	518.00
IUUC-Ppe-101632	Prunus persica	48.47	1.00e-88	318.00
IUUC-Pva-102484	Pteropus vampyrus	93.97	4.00e-178	616.00
IUUC-Pgr-103495	Puccinia graminis	40.48	4.00e-65	241.00
IUUC-Ptt-103975	Puccinia triticina	39.45	4.00e-63	234.00
IUUC-Pte-104354	Pyrenophora teres	37.55	2.00e-43	168.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	37.91	9.00e-43	166.00
IUUC-Rno-105655	Rattus norvegicus	91.43	1.00e-173	601.00
IUUC-Sha-107130	Sarcophilus harrisii	82.20	1.00e-111	395.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	41.29	4.00e-58	217.00
IUUC-Spo-108131	Schizosaccharomyces pombe	39.78	1.00e-56	213.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	35.47	8.00e-46	177.00
IUUC-Smo-108996	Selaginella moellendorffii	47.44	8.00e-79	286.00
IUUC-Sit-110508	Setaria italica	49.15	2.00e-86	311.00
IUUC-Sly-111093	Solanum lycopersicum	47.96	5.00e-80	290.00
IUUC-Stu-112380	Solanum tuberosum	47.96	6.00e-80	290.00
IUUC-Sar-113127	Sorex araneus	88.28	2.00e-72	265.00
IUUC-Sbi-114461	Sorghum bicolor	48.46	2.00e-85	308.00
IUUC-Sre-115020	Sporisorium reilianum	40.61	7.00e-41	162.00
IUUC-Ssc-115632	Sus scrofa	94.53	2.00e-176	610.00
IUUC-Tru-118039	Takifugu rubripes	71.57	2.00e-128	451.00
IUUC-Tsy-119239	Tarsius syrichta	96.45	2.00e-95	341.00
IUUC-Tni-120097	Tetraodon nigroviridis	69.91	6.00e-127	446.00
IUUC-Tca-121695	Theobroma cacao	51.02	2.00e-91	328.00
IUUC-Tre-122182	Trichoderma reesei	36.98	4.00e-50	191.00
IUUC-Tvi-122429	Trichoderma virens	37.21	4.00e-53	201.00
IUUC-Tae-125136	Triticum aestivum	50.51	1.00e-88	319.00
IUUC-Tur-126216	Triticum urartu	50.51	1.00e-88	318.00
IUUC-Tme-127030	Tuber melanosporum	42.65	2.00e-61	228.00
IUUC-Tbe-127686	Tupaia belangeri	93.12	7.00e-102	363.00
IUUC-Ttr-128770	Tursiops truncatus	91.75	2.00e-174	604.00
IUUC-Uma-129446	Ustilago maydis	34.74	1.00e-36	147.00
IUUC-Vda-129680	Verticillium dahliae	39.75	2.00e-42	165.00
IUUC-Vvi-131292	Vitis vinifera	51.19	2.00e-90	325.00
IUUC-Xtr-132204	Xenopus tropicalis	76.75	2.00e-148	517.00
IUUC-Xma-133727	Xiphophorus maculatus	73.63	7.00e-130	456.00
IUUC-Zma-135908	Zea mays	48.46	3.00e-79	288.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence