iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058623

Ensembl Protein ID

KEH43357

UniProt Accession

A0A072VNK4; A0A072VNK4_MEDTR

Genbank Protein ID

KEH43357.1

Protein Name

SEC12p-like protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g090873

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g090873	KEH43357	KEH43357
MTR_1g090873	KEH43356	KEH43356

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-07	32.9	159	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H++ v++++f  d  +l+s s Dg+ ++W + +gv++
   Q: 159  HKS-VRDMDFsLDsEFLASTSTDGSARIWKVEDGVPV 194
           666.9******555*******************9986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MENDAGSPQG PVTCGSWIRR PENLNLVVLG RSKRGNSCPA LLQIFSFDPI TVSLSTSPLT 60
NFVLEAEEGD PVAIAVHPSG DDFMCSLSNG SCKLFELYGH EANMKLLAKE LTPLQGICSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACAACAAC TTGTGCTATT TTGTCAAAAA AAATAAAAAA AAACAACAAC TTGTGCTAGT 60
GACCCTCTCT TTCCTCTTCG GATATTTCTA TATAACATTG CATTCTACAG ACGAAATTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0016036--P:cellular response to phosphate starvation
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006817--P:phosphate ion transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	53.28	7.00e-102	363.00
IUUC-Atr-002477	Amborella trichopoda	60.26	2.00e-130	457.00
IUUC-Bdi-014908	Brachypodium distachyon	53.12	5.00e-106	377.00
IUUC-Cel-018480	Caenorhabditis elegans	27.36	1.00e-09	57.40
IUUC-Gma-043653	Glycine max	86.80	0.00e+00	720.00
IUUC-Oba-075552	Oryza barthii	56.47	4.00e-123	433.00
IUUC-Ogl-077345	Oryza glaberrima	56.47	3.00e-123	434.00
IUUC-Ogu-078334	Oryza glumaepatula	56.47	4.00e-123	433.00
IUUC-Oin-079600	Oryza indica	55.29	3.00e-123	434.00
IUUC-Olo-080918	Oryza longistaminata	56.75	2.00e-123	434.00
IUUC-Ome-081986	Oryza meridionalis	56.47	3.00e-123	434.00
IUUC-Oni-082430	Oryza nivara	52.60	1.00e-92	332.00
IUUC-Opu-083902	Oryza punctata	55.17	9.00e-111	392.00
IUUC-Oru-084937	Oryza rufipogon	54.03	2.00e-92	331.00
IUUC-Osa-085881	Oryza sativa	55.29	3.00e-123	434.00
IUUC-Ppa-095904	Physcomitrella patens	39.74	2.00e-65	242.00
IUUC-Pop-099736	Populus trichocarpa	70.47	2.00e-164	570.00
IUUC-Ppe-101362	Prunus persica	74.62	1.00e-164	571.00
IUUC-Smo-108754	Selaginella moellendorffii	46.77	1.00e-71	262.00
IUUC-Sly-110920	Solanum lycopersicum	64.56	1.00e-133	468.00
IUUC-Stu-112065	Solanum tuberosum	64.05	3.00e-133	467.00
IUUC-Tca-121608	Theobroma cacao	70.03	1.00e-163	568.00
IUUC-Tae-124657	Triticum aestivum	53.85	1.00e-105	375.00
IUUC-Tur-126597	Triticum urartu	57.30	7.00e-87	312.00
IUUC-Vvi-131686	Vitis vinifera	73.56	1.00e-151	528.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence