iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095385

Ensembl Protein ID

PP1S65_250V6.1

UniProt Accession

A9SCH6; A9SCH6_PHYPA

Genbank Protein ID

EDQ71151.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544954

Gene Name

PHYPADRAFT_13541

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S65_250V6	PP1S65_250V6.1	PP1S65_250V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-24	85.6	58	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH + v++++f ++  llvsGs D +i vW++ 
   Q: 58   GHGGCVSSVSFdPTgELLVSGSFDQVIIVWNWA 90
           8***********778****************86 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MQFQSSRKMY PRQNLYECGL GEHWRLQIGD VSPAAFARQI GGCEELVRRF TMYGELSGHG 60
GCVSSVSFDP TGELLVSGSF DQVIIVWNWA ERRPVFTYNS GHEKNVFQAL VMPHCDNRII 120

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Nucleotide Sequence
(Fasta)

ATGCAGTTTC AGAGCTCAAG GAAGATGTAT CCTAGACAGA ATTTATACGA GTGTGGCTTA 60
GGGGAGCATT GGCGTCTCCA GATTGGGGAT GTGAGTCCTG CAGCCTTTGC GCGCCAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_13541

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence