iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108689

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377569

Gene Name

SELMODRAFT_405665

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_405665	EFJ34379	EFJ34379

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-24	84.6	310	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H +++++ a+ s+ +ll++G++D t+k+WD+r+++
   Q: 310  HPGGICATALsSSgKLLCTGGNDRTCKLWDTRSNH 344
           88999*****9556****************99876 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MESSPTELLD LPSDALLLCA GSLDLRDLSH LAMSCKRLRQ IAYADPLWER QCRIRWPAKQ 60
TTSGLFEFVG GRDDYLGRLI ACQQFRFRDP FEWQLSLPTM VKQILIHEDA IVAARGSEVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTCCT CTCCCACTGA GCTTTTGGAT CTTCCTTCGG ACGCTCTATT GCTCTGCGCG 60
GGGTCGCTCG ATCTCAGAGA TCTCTCACAT TTGGCGATGT CATGCAAGCG CCTTCGACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_405665

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	40.10	2.00e-78	285.00
IUUC-Bdi-014621	Brachypodium distachyon	36.34	4.00e-53	201.00
IUUC-Gma-043867	Glycine max	37.50	1.00e-73	270.00
IUUC-Hvu-047817	Hordeum vulgare	37.02	2.00e-62	232.00
IUUC-Lpe-051161	Leersia perrieri	37.38	2.00e-58	219.00
IUUC-Mtr-057899	Medicago truncatula	42.60	3.00e-54	204.00
IUUC-Mac-065373	Musa acuminata	40.24	6.00e-55	207.00
IUUC-Oba-075705	Oryza barthii	36.19	2.00e-59	222.00
IUUC-Obr-076913	Oryza brachyantha	36.99	2.00e-59	222.00
IUUC-Ogl-077871	Oryza glaberrima	36.19	2.00e-59	222.00
IUUC-Ogu-078128	Oryza glumaepatula	35.95	8.00e-59	220.00
IUUC-Oin-079947	Oryza indica	36.19	1.00e-59	223.00
IUUC-Olo-080246	Oryza longistaminata	37.59	7.00e-43	167.00
IUUC-Ome-081308	Oryza meridionalis	36.19	5.00e-59	221.00
IUUC-Oni-082542	Oryza nivara	36.19	1.00e-59	223.00
IUUC-Opu-083600	Oryza punctata	37.11	9.00e-61	226.00
IUUC-Oru-084880	Oryza rufipogon	35.95	2.00e-59	222.00
IUUC-Osa-085335	Oryza sativa	38.23	8.00e-45	173.00
IUUC-Ppa-095334	Physcomitrella patens	46.65	2.00e-95	342.00
IUUC-Pop-099428	Populus trichocarpa	43.01	6.00e-59	220.00
IUUC-Ppe-101795	Prunus persica	37.91	9.00e-63	233.00
IUUC-Sit-110574	Setaria italica	36.23	2.00e-52	199.00
IUUC-Sly-111776	Solanum lycopersicum	33.49	3.00e-58	218.00
IUUC-Stu-112081	Solanum tuberosum	35.45	6.00e-32	130.00
IUUC-Sbi-114123	Sorghum bicolor	33.89	6.00e-53	201.00
IUUC-Tca-120973	Theobroma cacao	37.74	5.00e-69	254.00
IUUC-Tae-123831	Triticum aestivum	36.01	2.00e-59	222.00
IUUC-Vvi-131356	Vitis vinifera	38.93	5.00e-72	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence