iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131616

UUCD1 version

UUC-ViV-00038

Ensembl Protein ID

VIT_12s0059g02140.t01

UniProt Accession

A5C5X2; A5C5X2_VITVI

Genbank Protein ID

CAN68678.1; CCB52034.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM483461; FN595765

Gene Name

VIT_12s0059g02140; VITISV_041941

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0059g02140	VIT_12s0059g02140.t01	VIT_12s0059g02140.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	8.80e-06	26.4	20	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 96   egpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkal 142
           egp ++ ++rlp +i++ il++l+ ++l++++ vcr w+ +a+++ l
   Q: 20   EGPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLL 66
           89*************************************88885554 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDLDFEKPGK RARYEMGGGE GPRTSFMERL PRDIILDILS RLPVTSLVQF RFVCRGWRLM 60
AQDSLLASKH LCRTAQYNPC LILHCDYPIR NQISFVDISA ESRDKDMVRK LTIPFWASMP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTATCTGCT CTTTTCTTCA TCTTCAACCC TTGGCTTTCT TCTTCTTCTT CTTCGCCCTT 60
ATGCAACTGT GCTTGTAGTG ATCGGCCTGC CATGGATTTG GACTTTGAGA AACCAGGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

SM00256--FBOX

KEGG

vvi:100261870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000580	Aegilops tauschii	22.86	5.00e-06	45.10
IUUC-Bdi-014511	Brachypodium distachyon	21.36	8.00e-13	67.00
IUUC-Bra-016667	Brassica rapa	29.32	2.00e-23	102.00
IUUC-Hvu-047063	Hordeum vulgare	28.71	2.00e-17	82.80
IUUC-Mtr-058414	Medicago truncatula	30.60	6.00e-26	112.00
IUUC-Oba-075140	Oryza barthii	26.57	1.00e-13	69.70
IUUC-Ome-081354	Oryza meridionalis	26.45	2.00e-11	63.90
IUUC-Oru-084992	Oryza rufipogon	26.57	4.00e-13	68.60
IUUC-Oga-088143	Otolemur garnettii	35.42	9.00e-03	33.10
IUUC-Ppa-095844	Physcomitrella patens	27.75	2.00e-06	45.80
IUUC-Ppe-102092	Prunus persica	33.33	2.00e-33	135.00
IUUC-Tae-125683	Triticum aestivum	27.15	5.00e-15	75.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence