iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017588

Ensembl Protein ID

Bra038283.1-P

UniProt Accession

M4FB17; M4FB17_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038283	Bra038283.1	Bra038283.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-24	85.2	59	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH++ v++++f s+ ++lvsGsdD +i++W+l 
   Q: 59   GHEGCVNAVEFsSTaDILVSGSDDRQIMLWNLL 91
           8**********9889****************85 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAKGRGSDEG FREIFKREMG FSHPRSISRR ISASEVLVFL SLSGRGIVKK LDVYGKLNGH 60
EGCVNAVEFS STADILVSGS DDRQIMLWNL LNGTRTLTYP SGHCENVFQT KFMPFTDDRT 120

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Nucleotide Sequence
(Fasta)

ATGGCGAAAG GAAGAGGAAG CGATGAAGGG TTCAGGGAGA TATTCAAGAG GGAGATGGGC 60
TTCTCTCATC CGAGGTCAAT CTCTCGTCGA ATCTCCGCCT CTGAGGTTCT CGTTTTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	48.20	2.00e-127	448.00
IUUC-Atr-002578	Amborella trichopoda	57.33	6.00e-158	550.00
IUUC-Aly-005818	Arabidopsis lyrata	85.21	0.00e+00	847.00
IUUC-Ath-006585	Arabidopsis thaliana	81.35	0.00e+00	843.00
IUUC-Bol-016291	Brassica oleracea	94.67	0.00e+00	947.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	32.77	6.00e-30	125.00
IUUC-Gma-044124	Glycine max	60.00	2.00e-170	592.00
IUUC-Hvu-047687	Hordeum vulgare	51.11	9.00e-133	466.00
IUUC-Lpe-051191	Leersia perrieri	54.66	3.00e-136	478.00
IUUC-Mtr-057813	Medicago truncatula	58.63	2.00e-166	578.00
IUUC-Mac-064558	Musa acuminata	52.65	3.00e-148	517.00
IUUC-Oan-073632	Ornithorhynchus anatinus	24.57	7.00e-18	85.10
IUUC-Oba-075746	Oryza barthii	51.27	8.00e-139	486.00
IUUC-Obr-076629	Oryza brachyantha	49.48	4.00e-140	491.00
IUUC-Ogl-077243	Oryza glaberrima	51.46	6.00e-142	497.00
IUUC-Ogu-078029	Oryza glumaepatula	52.71	8.00e-141	493.00
IUUC-Olo-080308	Oryza longistaminata	53.68	1.00e-132	466.00
IUUC-Ome-081126	Oryza meridionalis	55.01	1.00e-134	472.00
IUUC-Oni-083114	Oryza nivara	52.93	1.00e-141	496.00
IUUC-Opu-083288	Oryza punctata	54.77	5.00e-135	473.00
IUUC-Oru-084724	Oryza rufipogon	52.93	2.00e-141	495.00
IUUC-Osa-085895	Oryza sativa	51.46	6.00e-142	497.00
IUUC-Ppa-095764	Physcomitrella patens	47.87	4.00e-117	414.00
IUUC-Smo-108963	Selaginella moellendorffii	47.54	6.00e-122	430.00
IUUC-Sit-110823	Setaria italica	52.16	8.00e-144	503.00
IUUC-Sly-111605	Solanum lycopersicum	59.38	1.00e-163	568.00
IUUC-Stu-111978	Solanum tuberosum	57.73	2.00e-169	588.00
IUUC-Sbi-114455	Sorghum bicolor	53.25	7.00e-143	499.00
IUUC-Tae-125798	Triticum aestivum	50.44	4.00e-131	461.00
IUUC-Tur-126381	Triticum urartu	46.85	5.00e-112	397.00
IUUC-Vvi-131034	Vitis vinifera	58.04	8.00e-172	596.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence