iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043409

UUCD1 version

UUC-GlM-03460

Ensembl Protein ID

GLYMA08G40860.1

UniProt Accession

I1KXR3; I1KXR3_SOYBN

Genbank Protein ID

KRH45858.1; KRH45859.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841; CM000841

Gene Name

LOC100306222; GLYMA_08G297300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G40860	GLYMA08G40860.1	GLYMA08G40860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.00e-53	181.5	8	143

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWsp 94
           Rl++++k+l++dpp+gis  p+d+ +++ w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++Wsp
   Q: 8    RLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSP 98
           9**********************9.9************************************************************9..***** PP
   S: 95   alsvesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
            ++v+ +l+siqsll++pnp+sp+n+eaa+++++n++ey++kvre
   Q: 99   IYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRKVRE 143
           ******************************************985 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT 60
EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTATTT CCCGTGCATG GCTTTTTCTG AAATTAATTC TTACCCAGAT GAATAAGTGC 60
TTTGGAATTT GTTTCTAAGA ACCCCTTGTT TTGTGGGTAG CTTCCTACTT TGTGGTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006281--P:DNA repair
GO:0016574--P:histone ubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001001	Aegilops tauschii	96.05	5.00e-86	309.00
IUUC-Bdi-014308	Brachypodium distachyon	98.68	1.00e-87	314.00
IUUC-Cin-025537	Ciona intestinalis	70.67	2.00e-55	207.00
IUUC-Csv-025846	Ciona savignyi	69.74	3.00e-59	220.00
IUUC-Hvu-047054	Hordeum vulgare	96.05	5.00e-86	309.00
IUUC-Lpe-051301	Leersia perrieri	98.68	9.00e-88	315.00
IUUC-Mla-058876	Melampsora laricipopulina	70.00	2.00e-54	204.00
IUUC-Mac-065428	Musa acuminata	98.68	3.00e-88	317.00
IUUC-Oba-075847	Oryza barthii	98.68	4.00e-87	313.00
IUUC-Obr-076713	Oryza brachyantha	98.68	9.00e-88	315.00
IUUC-Ogl-077116	Oryza glaberrima	98.68	9.00e-88	315.00
IUUC-Ogu-078696	Oryza glumaepatula	98.68	9.00e-88	315.00
IUUC-Oin-079099	Oryza indica	98.68	9.00e-88	315.00
IUUC-Olo-081018	Oryza longistaminata	83.64	5.00e-75	273.00
IUUC-Ome-081285	Oryza meridionalis	98.68	9.00e-88	315.00
IUUC-Oni-082088	Oryza nivara	98.68	9.00e-88	315.00
IUUC-Opu-083310	Oryza punctata	98.68	9.00e-88	315.00
IUUC-Oru-084449	Oryza rufipogon	98.68	9.00e-88	315.00
IUUC-Osa-085923	Oryza sativa	98.68	9.00e-88	315.00
IUUC-Pma-094376	Petromyzon marinus	79.19	7.00e-72	262.00
IUUC-Ppa-095689	Physcomitrella patens	95.39	2.00e-73	267.00
IUUC-Sit-110731	Setaria italica	98.68	9.00e-88	315.00
IUUC-Stu-112518	Solanum tuberosum	98.68	4.00e-88	317.00
IUUC-Sbi-114870	Sorghum bicolor	98.68	5.00e-88	316.00
IUUC-Tae-124461	Triticum aestivum	97.37	7.00e-88	316.00
IUUC-Tur-126866	Triticum urartu	98.03	2.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence