iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121734

Ensembl Protein ID

EOY00873

UniProt Accession

A0A061E892; A0A061E892_THECC

Genbank Protein ID

EOY00873.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001880

Gene Name

TCM_010795

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_010795	EOY00874	EOY00874
TCM_010795	EOY00873	EOY00873

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-30	106.1	279	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM dPv+++sG+ty+r +Iekw+ +g++tcP+t+q+l + +l+Pn+ ++ li +wce+n++
   Q: 279  PPEELRCPISLQLMYDPVIIASGQTYERICIEKWFGDGHNTCPKTQQKLPHLSLTPNYCVKGLIASWCEQNGV 351
           59********************************************************************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDTSEVEENL FAASDAKLHG EMCKTLSAIY CKVLSIFPSL EAARPRSKSG IQALCSLHIA 60
LEKAKNVLQH CSTCSKLYLA ITGDSVLLKF EKAKCALIDS LRRVEDIVPQ SIGCQILEIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGACAGAT CTGCTAACCG ACAAACGAGG AGGTCGGCAA TTGTCGGCCG TCGAACCAGG 60
GAGACATAAA CGAAGAAATC CAAACCCCTC CCCCCAAATT TCAAAAACCC TTTTTTTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

tcc:TCM_010795

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	57.07	0.00e+00	839.00
IUUC-Atr-002816	Amborella trichopoda	58.32	0.00e+00	830.00
IUUC-Aly-006182	Arabidopsis lyrata	71.09	0.00e+00	1083.00
IUUC-Ath-007134	Arabidopsis thaliana	70.60	0.00e+00	1095.00
IUUC-Bdi-014509	Brachypodium distachyon	56.83	0.00e+00	816.00
IUUC-Bol-015505	Brassica oleracea	69.26	0.00e+00	1067.00
IUUC-Bra-017502	Brassica rapa	70.03	0.00e+00	1080.00
IUUC-Gma-043476	Glycine max	74.36	0.00e+00	1117.00
IUUC-Hvu-047761	Hordeum vulgare	57.09	0.00e+00	816.00
IUUC-Lpe-051154	Leersia perrieri	58.23	0.00e+00	847.00
IUUC-Mtr-058026	Medicago truncatula	72.68	0.00e+00	1037.00
IUUC-Mac-064644	Musa acuminata	55.33	0.00e+00	737.00
IUUC-Oba-075037	Oryza barthii	58.88	0.00e+00	877.00
IUUC-Obr-076068	Oryza brachyantha	57.46	0.00e+00	842.00
IUUC-Ogl-077029	Oryza glaberrima	58.88	0.00e+00	877.00
IUUC-Ogu-078230	Oryza glumaepatula	58.08	0.00e+00	870.00
IUUC-Oin-079566	Oryza indica	58.68	0.00e+00	876.00
IUUC-Olo-080879	Oryza longistaminata	59.57	0.00e+00	828.00
IUUC-Ome-081577	Oryza meridionalis	57.86	0.00e+00	875.00
IUUC-Oni-082610	Oryza nivara	58.33	0.00e+00	868.00
IUUC-Opu-083186	Oryza punctata	58.37	0.00e+00	879.00
IUUC-Oru-084375	Oryza rufipogon	58.02	0.00e+00	867.00
IUUC-Osa-085376	Oryza sativa	58.08	0.00e+00	867.00
IUUC-Ppa-095879	Physcomitrella patens	37.66	3.00e-82	299.00
IUUC-Pop-100088	Populus trichocarpa	78.10	0.00e+00	1226.00
IUUC-Ppe-101913	Prunus persica	77.88	0.00e+00	1222.00
IUUC-Sit-109865	Setaria italica	56.83	0.00e+00	870.00
IUUC-Sly-110840	Solanum lycopersicum	70.93	0.00e+00	1065.00
IUUC-Stu-112347	Solanum tuberosum	71.52	0.00e+00	1046.00
IUUC-Sbi-114310	Sorghum bicolor	56.36	0.00e+00	840.00
IUUC-Tae-123152	Triticum aestivum	57.27	0.00e+00	838.00
IUUC-Tur-126692	Triticum urartu	54.10	0.00e+00	718.00
IUUC-Vvi-131273	Vitis vinifera	76.84	0.00e+00	1223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence