iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109119

Ensembl Protein ID

EFJ32018

UniProt Accession

D8R884; D8R884_SELML

Genbank Protein ID

EFJ32018.1

Protein Name

Putative uncharacterized protein TPLb-2

Genbank Nucleotide ID

GL377573

Gene Name

TPLb-2; SELMODRAFT_439915

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_439915	EFJ32018	EFJ32018

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-22	77.6	451	487
UBD/Beta-Prp	2.40e-45	155.7	409	629

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H +sv++laf  ++  l ++s++dD+tikvWD  +g+
   Q: 451  HVGSVNDLAFahPNkQLcIISCGDDKTIKVWDAVSGR 487
           99*********97653359*************88887 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..s 105
            +t v +spd++++ +++  + ++v++++ g       ++  h + v+++ f +  k   ++++++D+tikvwd  +g   +t++ghe+ v+s+  +   +
   Q: 409  AVTRVVWSPDGNFIGVAFNKHIVQVYQYFGGVElrqQVEIDAHVGSVNDLAFAHPNKqlCIISCGDDKTIKVWDAVSGRNKYTFEGHEAPVYSVCPHHkeN 509
           35556667777777777777777777777777733333456677777777776666566777777777777777777777777777777777766555544 PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
            +++ s+  d  i+ w  +      + ++   ++ ++++++ dg  l+s+++    D+++  W+ + g + rt  g  +++ + ++fd ++++++++++  
   Q: 510  IQFIFSTAMDGKIKAWLYDCLGSRVDYDA-PGSWCTTMAYSADGTRLFSCGTskegDSFLVEWNESEGVIKRTYIGFRKRMPNVVQFDTTRNCFLAVGDEF 609
           47777777777777764443333332333.34466777777777666666643344666666666777777777666777777777777777777777777 PP
   S: 203  tvklwdlqtgecvrtlnght 222
           +vk+wd+ + + + +  +  
   Q: 610  SVKFWDMDNINLLTSIDADG 629
           77777777666666555555 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDQVQNGEW DEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRQDR ARAVEILVKD LKVFASFNED LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCAC TCAGCCGGGA GCTCGTGTTC CTCATCTTGC AGTTCCTGGA TGAGGAGAAA 60
TTCAAGGAGA CGGTGCACAA GTGAGAAGAT TTGTGGTTTG TTCTTGTTGG TGGATGTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

smo:SELMODRAFT_439915

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	68.97	0.00e+00	1565.00
IUUC-Bdi-014941	Brachypodium distachyon	68.22	0.00e+00	1545.00
IUUC-Hvu-047688	Hordeum vulgare	68.62	0.00e+00	1461.00
IUUC-Lpe-051683	Leersia perrieri	69.40	0.00e+00	1570.00
IUUC-Oba-075179	Oryza barthii	68.73	0.00e+00	1559.00
IUUC-Obr-076730	Oryza brachyantha	69.05	0.00e+00	1560.00
IUUC-Ogl-076958	Oryza glaberrima	69.53	0.00e+00	1600.00
IUUC-Ogu-078424	Oryza glumaepatula	68.73	0.00e+00	1559.00
IUUC-Oin-079972	Oryza indica	68.82	0.00e+00	1568.00
IUUC-Olo-080979	Oryza longistaminata	69.13	0.00e+00	1564.00
IUUC-Ome-081212	Oryza meridionalis	69.13	0.00e+00	1558.00
IUUC-Oni-082820	Oryza nivara	68.73	0.00e+00	1559.00
IUUC-Opu-083406	Oryza punctata	67.87	0.00e+00	1483.00
IUUC-Oru-084418	Oryza rufipogon	67.95	0.00e+00	1555.00
IUUC-Osa-086275	Oryza sativa	68.82	0.00e+00	1568.00
IUUC-Ppa-095845	Physcomitrella patens	73.25	0.00e+00	1636.00
IUUC-Pop-098876	Populus trichocarpa	68.43	0.00e+00	1519.00
IUUC-Sit-110121	Setaria italica	70.06	0.00e+00	1563.00
IUUC-Sbi-114078	Sorghum bicolor	68.54	0.00e+00	1508.00
IUUC-Tae-125775	Triticum aestivum	69.27	0.00e+00	1558.00
IUUC-Tur-126412	Triticum urartu	69.93	0.00e+00	1552.00
IUUC-Vvi-131109	Vitis vinifera	69.12	0.00e+00	1550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence