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Tag Content
UUCD2 ID IUUC-Sbi-114345
UUCD1 version UUC-SoB-01737
Ensembl Protein ID Sb01g046140.1
UniProt Accession C5WWV5; C5WWV5_SORBI
Genbank Protein ID EER92803.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000760
Gene Name SORBI_001G493700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g046140 Sb01g046140.1 Sb01g046140.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 5.30e-26 92.4 1254 1578
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP
   S: 1    tGlkNlgN..tCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw...kskkkavsprellkalkkeaee...fsg 86
           tGlkN      C++N ++Q+L++i+ +r+ +l+  +++l++     ++ + +++l  +f  l    k++ +av+p++l  al+k  ++   f++
   Q: 1254 TGLKNAAGeyNCFLNVIIQSLWHIRRFRDEFLK--TSSLHKH---VEDPCAVCALYGIFIDLSkaaKGQGEAVAPTSLRIALSKSYPNskfFQE 1342
           68999854237**********************..4444443...45667778888888888666699999************9977655688* PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgke 180
            + +Da+E+l ++++ l+++ ++    ++ +     ks+ +++  + +    +++ + lF++ + +++ c +c+ +s r  + +++  +++ ++
   Q: 1343 GQMNDASEVLGVIFECLHKSYTS---RTVYHG----KSHDKNSIGSWDCANISCIAHSLFGMDVYERMNCHNCKMESRRL-KYTSFFHNINASS 1428
           *********************33...333333....33333344555788899**********************99666.6788899999888 PP
   S: 181  etkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctsp 268
            +  +      s++++L+    +++l +++      c k       + l+++P+v+++ L +   +++++++    +   +  e+d+s f    
   Q: 1429 LRTAKmmcpdsSFDELLKVVIMNDQLACDQ--DVGGCGKPN--HIHHILSTFPHVFTVVLGWQ--NNKESVDDISATLAGISTEIDISIFYRGL 1516
           77666888888999****999999999987..555665444..45688***************..8888899999999999999****988884 PP
   S: 269  eekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtev.keeevleetg...staYvlfY 335
           +       k  L++vv+++G     HY++++ + +g+W+ +dD++V+++ ++++vl +++    ++ vlf+
   Q: 1517 DH----GSKHTLVSVVCYYG----QHYHCFAFK-DGRWVMYDDQTVKVIgSWDDVLVMCEkghLQPQVLFF 1578
           43....6799**********....9********.9**************7789999877655555666665 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MGRKKRTSAP NPTPPPPDAA RRPAGKAAGI GGEDAAVRAE VDKALACLQR GSHARALRLM 60
KDALARHGEA SSPLLLRAHG TVHARAASVL DDPAARARHH RAALQAAQRA VELAPESIEL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114345|DUB,USP|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGGCCGCA AAAAGCGAAC CTCCGCACCA AACCCTACTC CGCCACCGCC GGACGCCGCC 60
CGCCGGCCGG CGGGGAAGGC GGCCGGCATC GGCGGGGAAG ATGCCGCCGT GCGCGCCGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114345|DUB,USP|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR028889--USP_dom
IPR013087--Znf_C2H2_type
PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1
Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH
Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
KEGG sbi:SORBI_01g046140
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000820 Aegilops tauschii 52.48 1.00e-78 285.00
IUUC-Aml-001414 Ailuropoda melanoleuca 32.84 2.00e-41 164.00
IUUC-Atr-002451 Amborella trichopoda 41.12 0.00e+00 636.00
IUUC-Apl-003843 Anas platyrhynchos 31.56 2.00e-39 157.00
IUUC-Aca-004351 Anolis carolinensis 32.21 2.00e-41 164.00
IUUC-Aly-005468 Arabidopsis lyrata 40.14 3.00e-166 578.00
IUUC-Ath-006682 Arabidopsis thaliana 39.57 5.00e-171 594.00
IUUC-Ame-011525 Astyanax mexicanus 33.43 3.00e-43 170.00
IUUC-Bta-013344 Bos taurus 32.84 2.00e-41 164.00
IUUC-Bdi-015058 Brachypodium distachyon 65.54 0.00e+00 1804.00
IUUC-Bol-015670 Brassica oleracea 58.99 2.00e-133 469.00
IUUC-Bra-016731 Brassica rapa 41.73 0.00e+00 1073.00
IUUC-Cja-018724 Callithrix jacchus 32.84 1.00e-41 165.00
IUUC-Cfa-021222 Canis familiaris 32.84 1.00e-41 164.00
IUUC-Cpo-021795 Cavia porcellus 32.84 2.00e-41 164.00
IUUC-Cre-022697 Chlamydomonas reinhardtii 32.39 2.00e-41 165.00
IUUC-Csa-023262 Chlorocebus sabaeus 32.84 2.00e-41 164.00
IUUC-Cho-024422 Choloepus hoffmanni 31.29 3.00e-36 147.00
IUUC-Cin-025752 Ciona intestinalis 31.58 3.00e-11 60.10
IUUC-Csv-026063 Ciona savignyi 30.50 1.00e-34 139.00
IUUC-Dre-028046 Danio rerio 34.02 4.00e-44 173.00
IUUC-Dno-029317 Dasypus novemcinctus 30.17 1.00e-37 151.00
IUUC-Dor-030249 Dipodomys ordii 31.09 7.00e-39 155.00
IUUC-Dme-032071 Drosophila melanogaster 31.14 2.00e-38 154.00
IUUC-Ete-032403 Echinops telfairi 31.56 5.00e-39 155.00
IUUC-Eca-033235 Equus caballus 32.55 5.00e-41 162.00
IUUC-Eeu-035319 Erinaceus europaeus 31.25 4.00e-16 79.70
IUUC-Fca-036070 Felis catus 32.84 1.00e-41 165.00
IUUC-Fal-037089 Ficedula albicollis 31.93 1.00e-42 168.00
IUUC-Gmo-039688 Gadus morhua 31.14 4.00e-39 154.00
IUUC-Gga-041241 Gallus gallus 33.04 9.00e-43 169.00
IUUC-Gac-042157 Gasterosteus aculeatus 33.33 9.00e-44 171.00
IUUC-Gma-043691 Glycine max 41.73 0.00e+00 1106.00
IUUC-Ggo-045626 Gorilla gorilla 32.84 1.00e-41 164.00
IUUC-Hsa-045767 Homo sapiens 32.84 1.00e-41 165.00
IUUC-Hvu-047657 Hordeum vulgare 64.67 0.00e+00 1667.00
IUUC-Itr-048187 Ictidomys tridecemlineatus 32.84 2.00e-41 164.00
IUUC-Lch-049712 Latimeria chalumnae 33.14 1.00e-40 159.00
IUUC-Lpe-051572 Leersia perrieri 62.23 0.00e+00 1672.00
IUUC-Loc-052615 Lepisosteus oculatus 34.31 2.00e-43 171.00
IUUC-Laf-054578 Loxodonta africana 32.84 2.00e-41 164.00
IUUC-Mcc-054696 Macaca mulatta 32.84 1.00e-41 165.00
IUUC-Meu-056802 Macropus eugenii 28.32 9.00e-30 125.00
IUUC-Mtr-058682 Medicago truncatula 42.06 0.00e+00 1042.00
IUUC-Mga-059684 Meleagris gallopavo 30.21 6.00e-36 145.00
IUUC-Mmr-060701 Microcebus murinus 32.84 2.00e-41 164.00
IUUC-Mdo-062433 Monodelphis domestica 32.55 1.00e-40 162.00
IUUC-Mmu-063480 Mus musculus 32.55 2.00e-41 164.00
IUUC-Mac-064469 Musa acuminata 46.96 2.00e-174 605.00
IUUC-Mpu-066404 Mustela putorius furo 32.84 6.00e-41 162.00
IUUC-Mlu-067841 Myotis lucifugus 32.84 1.00e-41 165.00
IUUC-Nle-070110 Nomascus leucogenys 32.84 1.00e-41 164.00
IUUC-Opr-070676 Ochotona princeps 29.86 2.00e-18 87.80
IUUC-Ont-072449 Oreochromis niloticus 31.86 1.00e-42 167.00
IUUC-Oan-073551 Ornithorhynchus anatinus 32.55 4.00e-41 163.00
IUUC-Ocu-074729 Oryctolagus cuniculus 32.84 2.00e-41 164.00
IUUC-Oba-075174 Oryza barthii 61.30 0.00e+00 1587.00
IUUC-Obr-076268 Oryza brachyantha 60.80 0.00e+00 1579.00
IUUC-Ogl-077138 Oryza glaberrima 63.80 0.00e+00 1699.00
IUUC-Ogu-078705 Oryza glumaepatula 61.42 0.00e+00 1595.00
IUUC-Oin-079125 Oryza indica 63.34 0.00e+00 1696.00
IUUC-Olo-080872 Oryza longistaminata 60.33 0.00e+00 1468.00
IUUC-Ome-081864 Oryza meridionalis 62.52 0.00e+00 1649.00
IUUC-Oni-082109 Oryza nivara 60.77 0.00e+00 1589.00
IUUC-Opu-083823 Oryza punctata 63.66 0.00e+00 1693.00
IUUC-Oru-084310 Oryza rufipogon 61.23 0.00e+00 1608.00
IUUC-Osa-085583 Oryza sativa 72.85 0.00e+00 713.00
IUUC-Ola-086742 Oryzias latipes 31.04 7.00e-42 164.00
IUUC-Oga-088920 Otolemur garnettii 32.84 2.00e-41 164.00
IUUC-Oar-089644 Ovis aries 32.84 1.00e-41 165.00
IUUC-Ptr-091530 Pan troglodytes 32.84 1.00e-41 164.00
IUUC-Pan-092190 Papio anubis 32.84 2.00e-41 164.00
IUUC-Psi-094022 Pelodiscus sinensis 32.21 2.00e-41 164.00
IUUC-Pma-094745 Petromyzon marinus 27.45 4.00e-29 121.00
IUUC-Ppa-095930 Physcomitrella patens 52.87 3.00e-127 449.00
IUUC-Pfo-096829 Poecilia formosa 32.83 1.00e-43 171.00
IUUC-Pab-097979 Pongo abelii 32.84 2.00e-41 164.00
IUUC-Pop-099539 Populus trichocarpa 40.00 4.00e-180 625.00
IUUC-Pca-101005 Procavia capensis 31.02 7.00e-24 106.00
IUUC-Ppe-101918 Prunus persica 42.74 0.00e+00 651.00
IUUC-Pva-103125 Pteropus vampyrus 32.55 1.00e-40 161.00
IUUC-Rno-105463 Rattus norvegicus 33.14 1.00e-41 165.00
IUUC-Sha-107164 Sarcophilus harrisii 32.84 9.00e-42 165.00
IUUC-Sit-110021 Setaria italica 79.14 0.00e+00 1178.00
IUUC-Sly-111258 Solanum lycopersicum 43.20 0.00e+00 1150.00
IUUC-Stu-112904 Solanum tuberosum 42.92 0.00e+00 1111.00
IUUC-Sar-113376 Sorex araneus 32.02 7.00e-19 89.00
IUUC-Ssc-115969 Sus scrofa 30.28 2.00e-37 150.00
IUUC-Tgu-116521 Taeniopygia guttata 31.93 4.00e-42 166.00
IUUC-Tru-117981 Takifugu rubripes 30.10 1.00e-36 146.00
IUUC-Tsy-118998 Tarsius syrichta 28.53 2.00e-30 128.00
IUUC-Tni-120257 Tetraodon nigroviridis 32.25 2.00e-38 152.00
IUUC-Tca-121692 Theobroma cacao 43.87 0.00e+00 1181.00
IUUC-Tae-125619 Triticum aestivum 64.95 0.00e+00 1732.00
IUUC-Tur-126027 Triticum urartu 65.13 0.00e+00 1483.00
IUUC-Tbe-127607 Tupaia belangeri 31.09 1.00e-39 157.00
IUUC-Ttr-128647 Tursiops truncatus 29.75 2.00e-34 140.00
IUUC-Vpa-130213 Vicugna pacos 32.02 2.00e-41 164.00
IUUC-Vvi-131652 Vitis vinifera 44.25 0.00e+00 1143.00
IUUC-Xtr-131831 Xenopus tropicalis 33.43 2.00e-42 167.00
IUUC-Xma-133409 Xiphophorus maculatus 33.92 9.00e-44 171.00
Created Date 25-Jun-2017

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