iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017475

Ensembl Protein ID

Bra036523.1-P

UniProt Accession

M4F614; M4F614_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra036523	Bra036523.1	Bra036523.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-09	38.7	210	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWDlrt 32
           gH++s++cl  f   s+  llvsG+ Dg + +W+ + 
   Q: 210  GHKGSIYCLMnFmasSGeALLVSGGSDGLLILWNADH 246
           8*******855***766789*************9655 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLRARAFRQT NNKIVKIQVH PTHPWLVTAD DTDHVSVWNW EHRQVIYELK AGGVDERRLV 60
GAKLEKLAEG DSDYKGKPTE AIRGGSVKQV KFYDDDVRYW QLWRNRSAAA ESPSAVDHLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCGCG CGAGAGCGTT TCGGCAGACC AACAATAAGA TCGTGAAGAT ACAGGTGCAT 60
CCCACGCACC CATGGCTCGT TACGGCCGAT GATACGGATC ACGTCTCCGT CTGGAACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002897	Amborella trichopoda	73.72	0.00e+00	1669.00
IUUC-Aly-006154	Arabidopsis lyrata	92.41	0.00e+00	2135.00
IUUC-Ath-007285	Arabidopsis thaliana	92.41	0.00e+00	2138.00
IUUC-Bdi-014824	Brachypodium distachyon	75.19	0.00e+00	1654.00
IUUC-Bol-016428	Brassica oleracea	98.68	0.00e+00	2215.00
IUUC-Gma-043699	Glycine max	79.47	0.00e+00	1793.00
IUUC-Mtr-058798	Medicago truncatula	79.46	0.00e+00	1820.00
IUUC-Mac-065076	Musa acuminata	75.14	0.00e+00	1815.00
IUUC-Oba-075727	Oryza barthii	74.11	0.00e+00	1640.00
IUUC-Obr-076460	Oryza brachyantha	75.98	0.00e+00	1707.00
IUUC-Ogl-077837	Oryza glaberrima	76.40	0.00e+00	1719.00
IUUC-Ogu-078912	Oryza glumaepatula	74.11	0.00e+00	1640.00
IUUC-Oin-079644	Oryza indica	76.40	0.00e+00	1715.00
IUUC-Olo-080463	Oryza longistaminata	74.46	0.00e+00	1415.00
IUUC-Ome-081748	Oryza meridionalis	74.11	0.00e+00	1634.00
IUUC-Oni-083096	Oryza nivara	74.11	0.00e+00	1637.00
IUUC-Opu-083280	Oryza punctata	76.32	0.00e+00	1734.00
IUUC-Oru-084728	Oryza rufipogon	74.11	0.00e+00	1636.00
IUUC-Osa-085295	Oryza sativa	76.40	0.00e+00	1715.00
IUUC-Ppa-095297	Physcomitrella patens	57.11	0.00e+00	1278.00
IUUC-Ppe-101567	Prunus persica	77.82	0.00e+00	1860.00
IUUC-Smo-109297	Selaginella moellendorffii	58.61	0.00e+00	1313.00
IUUC-Sit-109913	Setaria italica	75.95	0.00e+00	1707.00
IUUC-Sly-110980	Solanum lycopersicum	78.91	0.00e+00	1729.00
IUUC-Stu-112643	Solanum tuberosum	79.16	0.00e+00	1737.00
IUUC-Sbi-114411	Sorghum bicolor	75.92	0.00e+00	1355.00
IUUC-Tca-121691	Theobroma cacao	81.89	0.00e+00	1891.00
IUUC-Tae-124034	Triticum aestivum	75.36	0.00e+00	1619.00
IUUC-Vvi-131320	Vitis vinifera	82.71	0.00e+00	1213.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence