iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095630

Ensembl Protein ID

PP1S124_170V6.1

UniProt Accession

A9SVK7; A9SVK7_PHYPA

Genbank Protein ID

EDQ64835.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545013

Gene Name

PHYPADRAFT_216156

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S124_170V6	PP1S124_170V6.1	PP1S124_170V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-11	44.3	486	521

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gH + vt+la    s+ +++s+s Dgt+++W  ++g
   Q: 486  GHDGTVTDLAVpsfSTSRVASASQDGTVRIWGDTSG 521
           8********988876689*************76666 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGATGPSGGF DIHNFFNNPP PSPYPPPQYS SHPPYPAAQF PQNSGPFPTN SGSFPSMPPQ 60
NFQYSSSQQQ QEQTQVFHPY MHYQQEHGQR PSSYTTAPYN QHQQQQQVQF PPPGALNSLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCCA CAGGACCGTC GGGAGGTTTC GACATCCATA ATTTCTTCAA CAATCCACCT 60
CCGAGCCCAT ATCCTCCTCC CCAGTACTCA TCTCACCCTC CTTATCCCGC TGCTCAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

ppp:PHYPADRAFT_216156

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence