iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015812

Ensembl Protein ID

Bo3g068100.1

UniProt Accession

A0A0D3BBJ9; A0A0D3BBJ9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g068100	Bo3g068100.1	Bo3g068100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-21	76.5	461	501
UBD/Beta-Prp	1.80e-42	147.0	355	539

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgvllks 38
           H++ v++laf  ++    +v+++ D+tikvWD  tg++l++
   Q: 461  HAGNVNDLAFslPNqqLCFVTCGEDKTIKVWDAVTGNKLHT 501
           99**********6654448*****************99875 PP

UBD/Beta-Prp

   S: 94   edsvlslsfsp.sgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
            + + s++f+p ++  l++G+++  i +w++ ++ +l +                  + s+ +++vn vv++pdg ll  +    +v +++   g+ 
   Q: 355  GSAIKSMDFHPvQQTMLLVGTNVGDIAIWEVGSRDKLVSrsfkvwdlasctanlqasLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGND 451
           567899*****888******************************************************************************99999 PP
   S: 172  lrtl..tgghtdsvyslsfd.sng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriW...d 250
           lr      +h + v+ l+f+ +n+  ++v++++d+t+k+wd  tg+ ++t++gh+++v+sv  +  +n +++ s++ Dg i+ W   +
   Q: 452  LRNHleVDAHAGNVNDLAFSlPNQqLCFVTCGEDKTIKVWDAVTGNKLHTFEGHDAPVYSVCPHqkENIQFIFSTAVDGKIKAWlydN 539
           999878456*********7644443799*********************************9995567778*************5543 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFYFNMRY FEDSVTAGEW DDVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKKDN AKAVEILVKE LKVFSTFNEE LFKEITMLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGC TCAGCAGAGA ACTCGTCTTT TTGATTCTCC AGTTTCTCGA CGAAGAGAAA 60
TTCAAAGACA CTGTTCACAG GTCAATATTC AATATTCAAA TTCCCCCTTA AATTGTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006463	Arabidopsis lyrata	94.54	0.00e+00	2082.00
IUUC-Ath-007634	Arabidopsis thaliana	94.36	0.00e+00	2115.00
IUUC-Bra-017609	Brassica rapa	97.88	0.00e+00	2201.00
IUUC-Gma-043971	Glycine max	74.58	0.00e+00	1699.00
IUUC-Mtr-058586	Medicago truncatula	74.05	0.00e+00	1700.00
IUUC-Pop-099918	Populus trichocarpa	74.08	0.00e+00	1688.00
IUUC-Ppe-101506	Prunus persica	73.74	0.00e+00	1695.00
IUUC-Sly-111451	Solanum lycopersicum	76.04	0.00e+00	1760.00
IUUC-Stu-112409	Solanum tuberosum	71.67	0.00e+00	1629.00
IUUC-Tca-121699	Theobroma cacao	74.22	0.00e+00	1724.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence