iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099860

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_209220; POPTR_0005s17820g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s17820	POPTR_0005s17820.1	POPTR_0005s17820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.60e-75	253.5	591	895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           +Gl N gN+CY N+vLQcL+++p+l++++ +       + ++  +++ ++++++++++ +  k+ k+  sp  +l++l+++ +++ + +++
   Q: 591  CGLINCGNSCYANAVLQCLAFTPPLTSFFVQgL-----HSKSCLNRECCFSCEFESIILKA-KEGKSPLSPLGILSQLQNIGSQLGNGREE 675
           7******************************43.....3344466799**********988.99999************************ PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
           Da+Efl++ +d++++ +         +e +         +  +   ++++li  +F+g l+s+ikc +c+ +s+r+e ++dl+++++g+  
   Q: 676  DAHEFLRYAIDAMQSVC--------LKEAGV--------NAMDSFAEETTLIGLTFGGYLHSKIKCMKCHYKSERQERMMDLTVEIEGNIG 750
           *****************........222222........23344567899***************************************95 PP
   S: 182  tkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekq 272
               +l+d+L+ ft++e l+g+nky+c +ck++ +a+kk+++ + P+vL++ LkRf   ++ ++  k+nk++ fp+ Ldl+p+++ +++k 
   Q: 751  ----KLEDALRRFTSAEILDGDNKYQCGRCKSYEKAKKKMTILEAPNVLTIALKRF---QS-GKFGKLNKSIRFPEILDLAPYMSGTSDK- 832
           ....8***************************************************...33.4557********************6655. PP
   S: 273  kekkkYeLiavvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             + +Y+L++v+vH      + sGHYv+yvkn ++kW+++dDs+Vt+v+ e+vl+   + aY+l+Y r
   Q: 833  --SPIYRLYGVIVHLDvmnAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLS---KGAYMLLYAR 895
           ..79**********873325569********************************...********87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHVEGDLGFS SLVVLVFCVV IIPLGCFIIR CKWRGAVARK EDIKRLLVLA AEEAARAEFE 60
AAASYGTVPV LTNNYQCAVC FCPTTTRCAR CKAVRYCSGK CQIIHWRQGH KEECHPPTTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTCTCCT TCTTAATTCC CCCTCTTTGA AAATAAACAA AAACAAAAAC AAGAAGCCCT 60
GAAATCTCGA TCTGATTGTC CGAAAATCCT CTAGCTAAAA GACCACTTTT TTTTTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s17820g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002920	Amborella trichopoda	68.48	2.00e-158	552.00
IUUC-Aly-005811	Arabidopsis lyrata	44.42	0.00e+00	651.00
IUUC-Cne-027049	Cryptococcus neoformans	32.49	5.00e-36	145.00
IUUC-Gma-044069	Glycine max	51.38	0.00e+00	778.00
IUUC-Mtr-058629	Medicago truncatula	49.26	0.00e+00	759.00
IUUC-Mac-065141	Musa acuminata	55.63	5.00e-164	571.00
IUUC-Ppe-101801	Prunus persica	54.51	0.00e+00	884.00
IUUC-Tca-121756	Theobroma cacao	55.83	0.00e+00	929.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence