iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111007

Ensembl Protein ID

Solyc07g054200.2.1

UniProt Accession

K4CFW5; K4CFW5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g054200.2	Solyc07g054200.2.1	Solyc07g054200.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	5.60e-06	26.9	2	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlkvnpsd.tVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihll 70
           v++  +++++ltl++np   + ++L   i++k++ip  qqrL+ +++ L +    L+d+g+ ++st+ l 
   Q: 2    VFINLPNHKTLTLEINPFVtSLQTLTLAIHQKFHIPITQQRLYSSCRRLlDVEALLSDLGISPNSTLTLH 71
           788899999*********999**********************99777669999*************886 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVFINLPNHK TLTLEINPFV TSLQTLTLAI HQKFHIPITQ QRLYSSCRRL LDVEALLSDL 60
GISPNSTLTL HVPLFGGMQA PGAPKARLEF LNTRPPPNYV AGLGRGATGF TTRSDIGPAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACACTACAG AAATGAATTC GTACCGATTT GCCTGATCCA GAAAAAGGTG AAATTGTTGT 60
GTTTATTCAG CTGTCAACGA TTTGCTCAAC AACGAACAGT CATGGTGTTC ATCAATCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR003107--HAT
IPR010491--PRP1_N
IPR027108--Prp6/Prp1/STA1
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50005--TPR
PS50053--UBIQUITIN_2

Pfam

PF06424--PRP1_N
PF00240--ubiquitin

SMART

SM00386--HAT

Gene Ontology

GO:0005634--C:nucleus
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058181	Medicago truncatula	42.86	4.00e-14	70.90
IUUC-Mac-065093	Musa acuminata	58.21	0.00e+00	679.00
IUUC-Ppa-095358	Physcomitrella patens	62.18	0.00e+00	808.00
IUUC-Ppe-101962	Prunus persica	67.91	0.00e+00	844.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence