iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112717

Ensembl Protein ID

PGSC0003DMT400000679

UniProt Accession

M0ZH57; M0ZH57_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400000241	PGSC0003DMT400000679	PGSC0003DMT400000679
PGSC0003DMG400000241	PGSC0003DMT400000680	PGSC0003DMT400000680

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-24	85.9	260	326

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
            f CpI+ e+M+dPv +psG+t++r +Iekwla+g+  cP+t++pl ++++ Pn+tlr+ i++w ++n
   Q: 260  SFYCPITREVMTDPVETPSGHTFERCAIEKWLAEGNL-CPMTSTPLNNTMMRPNKTLRQSIEEWKDRN 326
           699*********************************9.**************************9988 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MVPDMICGPF ADLLSSTIEC ILEIVLTSKN VFIEKKSFAE LSAYLNRIVP FLKEINRKNI 60
TDSTPWENVI QILNRQTVDA RQLILECSKK NKVYLLMNCR LIAKRIQNIT REISRALSCI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTACTTCCT GGTATTTTCG CCTGCATTTC TTGCCAAAAC CAAAATATCA TGTATCTCGA 60
GTTTGGGTTT CGATTTTTCC AATTTGTTTT TTTTCAGCTA ACTCTCTAGC ACAGTCAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR006911--ARM-rpt_dom
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04826--Arm_2
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102593068

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002671	Amborella trichopoda	52.64	0.00e+00	969.00
IUUC-Gma-042663	Glycine max	57.00	0.00e+00	1072.00
IUUC-Mtr-057765	Medicago truncatula	56.46	0.00e+00	1082.00
IUUC-Mac-064496	Musa acuminata	49.95	0.00e+00	808.00
IUUC-Ppa-095681	Physcomitrella patens	39.48	1.00e-177	616.00
IUUC-Pop-099169	Populus trichocarpa	62.29	0.00e+00	1095.00
IUUC-Ppe-101683	Prunus persica	61.72	0.00e+00	1138.00
IUUC-Smo-109439	Selaginella moellendorffii	41.36	0.00e+00	704.00
IUUC-Sly-111419	Solanum lycopersicum	94.78	0.00e+00	1795.00
IUUC-Tca-121719	Theobroma cacao	61.44	0.00e+00	1152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence